Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00808 ATGGCTGCAACTTCTTCCTTGTGTTCATCCACCCTCCAATCCCAAATCAATGGTCTCCACCTTCACAAAACCACTCTTTTTCATCCTCCTTCCCTCACTTTCTCCAGGAGGAAACTTTCAACCATCGTGAAGGCTTCATCTCGTGTTGACAAGTTTTCAAAAAGCGATATCATTGTTTCCCCATCCATTCTTTCTGCCAACTTTTCAAAATTGGGAGAGCAGGTGAAAGCAGTGGAGTTGGCTGGTTGTGATTGGATTCATGTTGATGTAATGGATGGACGCTTTGTCCCAAATATTACAATTGGACCTCTTGTGGTTGATGCATTGCGCCCTGTGACGGATCTTCCTTTGGATGTGCACCTGATGATTGTGGAGCCTGAACAAAGGGTGCCAGATTTTATCAAGGCAGGAGCTGATATTGTCAGTGTTCATTGTGAACAATCTTCCACCATCCATTTGCACCGTACAGTTAATCAAAATATACTTCACGATGTGGATAGAGCATTAACAAGGCAGTCTGAGGACAGGATAAAGAAATGGCCACAGCAAATTCTCGTGGTGAAAAGTCTGGGCGCCAAAGCTGGAGTTGTCTTAAACCCTGCAACTCCCTTAAGCACAATAGAATATGTCCTTGATGTGGTTGATTTAGTCTTAATCATGTCTGTAAACCCTGGCTTTGGTGGCCAGAGTTTTATTGAGAGTCAAGTAAAGAAAATTTCTGATTTGAGAAGACTGTGCGCAGAGAAGGGAGTAAATCCATGGATTGAAGTAGATGGTGGAGTTGGACCAGCAAATGCTTACAAGGTGATTGAGGCTGGAGCCAATGCACTGGTTGCTGGTTCTGCTGTATTTGGAGCTAAAGATTATGCTGAAGGTACTCAAAATAATATTTTATCTATAAGAGGAATCAAAACCAGCAAAAGACCTGAAGCAGTTACTGTGTGA 945 0.4286 MAATSSLCSSTLQSQINGLHLHKTTLFHPPSLTFSRRKLSTIVKASSRVDKFSKSDIIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQNILHDVDRALTRQSEDRIKKWPQQILVVKSLGAKAGVVLNPATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKDYAEGTQNNILSIRGIKTSKRPEAVTV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00808 314 SUPERFAMILY Ribulose-phoshate binding barrel 58 293 IPR011060 -
Vimu7g00808 314 Gene3D Aldolase class I 47 296 IPR013785 -
Vimu7g00808 314 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 217 239 IPR000056 GO:0005975|GO:0016857
Vimu7g00808 314 Hamap Ribulose-phosphate 3-epimerase [rpe]. 56 303 IPR026019 GO:0004750|GO:0006098
Vimu7g00808 314 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 1. 86 100 IPR000056 GO:0005975|GO:0016857
Vimu7g00808 314 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 57 294 IPR000056 GO:0005975|GO:0016857
Vimu7g00808 314 CDD RPE 58 301 IPR000056 GO:0005975|GO:0016857
Vimu7g00808 314 Pfam Ribulose-phosphate 3 epimerase family 177 284 IPR000056 GO:0005975|GO:0016857
Vimu7g00808 314 Pfam Ribulose-phosphate 3 epimerase family 59 159 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00808 Vimu-Chr7 8029255 8033523 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00808 K01783 - gmx:100817791 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00808 7 8029255 8033523 Vimu7g00808 7 8029255 8033523 ECH