Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00804 TTGGATAAGGAAGAAAAAGGGGCAAAGAGAATGAAGGGTAGTCATGGTACTGAGTGGAGTAGCAGAGAAGAAAGAAGAAGAAGGGCGAGGTCTTCGTCACCACTGAAGGACGGATCCAAAACCTCTTCGTCTAAGTTATCTTCTCCGTCCAAACGGAGCACATCACCTTCTGCCACTCTCCTCGACGTTGACCATGACGTATTCTCTCTCTCTCACGATTATCCTAACCCTAACCCTCGGAGCTTCCCACACAGCGTTAAGCAGAAATGCTGGGAAAAGGCAGACAAGGTCAAAGGACGAGACCCCGACCGCTGGCGCAGGGACGCCCTCGGCAATACTGTCTTTCGCAAGCTCGTAGGTTGCCCCGGTTGTCTCTGTCATGACTACGACCACATTGTCCCTTACTCTAAGGGGGGAGAAAGCACTCTGGAAAACTGTCAAGTATTACAAGCAACAGTTAATCGTTCAAAGGGTAACCGAACAGATATCTCCAAAGCTGAACTTATTCAAAAGAGTTCTTATTGCAGGGTTTCAGATCGTGACATGGATCTTCTTGAACTGTCTGCCTATGGGAATGTCCGGCGTGGACCCGATAATGGGGGATGTAGAATCCAATGA 618 0.4887 MDKEEKGAKRMKGSHGTEWSSREERRRRARSSSPLKDGSKTSSSKLSSPSKRSTSPSATLLDVDHDVFSLSHDYPNPNPRSFPHSVKQKCWEKADKVKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHIVPYSKGGESTLENCQVLQATVNRSKGNRTDISKAELIQKSSYCRVSDRDMDLLELSAYGNVRRGPDNGGCRIQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00804 205 PANTHER HNH ENDONUCLEASE 4 205 - -
Vimu7g00804 205 SMART HNH_5 110 155 IPR003615 -
Vimu7g00804 205 MobiDBLite consensus disorder prediction 35 60 - -
Vimu7g00804 205 MobiDBLite consensus disorder prediction 1 34 - -
Vimu7g00804 205 Pfam HNH endonuclease 127 160 IPR002711 GO:0003676|GO:0004519|GO:0008270
Vimu7g00804 205 MobiDBLite consensus disorder prediction 1 60 - -
Vimu7g00804 205 CDD HNHc 114 158 IPR003615 -
Vimu7g00804 205 Gene3D - 85 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00804 Vimu-Chr7 7983508 7985393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00804 - - gmx:100500174 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00804 7 7983508 7985393 Vimu7g00804 7 7983508 7985393 ECH