Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00801 ATGGACTTCAATCTTGCATTAGTCATTGTGGTAATCACCATTTTGGGAATTGGTCTTGATGGATGCCATAGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCTGATGTTGGTAATAACATGCATCTCTCTAGAAGCCTGGCTCAAGCAAGCTTGCCTTGGTATGGCATAGACATGGGAAATGGGTTACCTAATGGAAGGTTCACTAATGGTCGCACAGTAGCTGACATAATAGGTGACCGTACTGGCCTCCCTAGGCCTCCTGCATTCCTGGACCCATCTGTGAGTGAAGAAGTTATACTAGAAAATGGTGTGAACTATGCTTCTGGTGGTGGCGGCATTTTGAATGAAACCGGTGCCTATTTTATCCAAAAGTTTTCCCTGGACAAACAAATTGAGCTATTTCAGGGGACACAGGAGTTAATCAGAGGTAAAATTGGAAAAAGGGCCGCTGACAAGTTTTTCAAGGAAGGTCGTTACGTTGTTGCTTTAGGGAGCAATGATTTCATCAACAACTACTTGATGCCAGTTTACAGAGATTCATGGACATACAATGATGACACATTCATGGACTACTTAATAGGAACACTGGAAAGACAGCTAAAGTTACTTCATAGTTTAGGAGCAAGACAGCTGGTGGTTTTCGGGTTGGGTCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTCAGTACAACTGGGAATTGTCGAGAAAAGGCGAACAAGCTGGCTCTTACCTTCAACAAAGCTGTAAGCGAGTTAGTAGATGACTTGGGGAAGCATTTTCCTGATTCAACCTATAGATTTGGAGATGCATATGATGTTGTCTATGATGTGATTAGCAATCCAAATAAGTATGGATTTCAAAACTCAGACTCGCCATGCTGTTCCTTCTGGAATATTCGACCTGCCCTTACATGTGTACCTGCATCAAGTCTGTGCAAAGATAGAAGTAAATATGTCTTTTGGGATGAGTACCACCCCACAGACAGTGCTAATGAGCTTATTGCAGATGAACTCATCAAGAAATTTGGACTTTTGAATTCTGATCAAGGGGGAGCACCTTCACCAGCTCCTGATGTTGCTCCATCTCCAGAAGACCAGTGA 1107 0.4327 MDFNLALVIVVITILGIGLDGCHSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDRTGLPRPPAFLDPSVSEEVILENGVNYASGGGGILNETGAYFIQKFSLDKQIELFQGTQELIRGKIGKRAADKFFKEGRYVVALGSNDFINNYLMPVYRDSWTYNDDTFMDYLIGTLERQLKLLHSLGARQLVVFGLGPMGCIPLQRVLSTTGNCREKANKLALTFNKAVSELVDDLGKHFPDSTYRFGDAYDVVYDVISNPNKYGFQNSDSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIADELIKKFGLLNSDQGGAPSPAPDVAPSPEDQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00801 368 Gene3D SGNH hydrolase 27 344 IPR036514 -
Vimu7g00801 368 MobiDBLite consensus disorder prediction 348 368 - -
Vimu7g00801 368 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Vimu7g00801 368 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Vimu7g00801 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 343 - -
Vimu7g00801 368 SUPERFAMILY SGNH hydrolase 156 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00801 Vimu-Chr7 7954229 7957000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00801 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 3.93e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00801 - - gmx:100815129 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00801 7 7954229 7957000 Vimu7g00801 7 7954229 7957000 ECH