Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00795 ATGTCAGACAGGAACGTTGTCTCCCCAAGATTCTTTATGTTTTGTGTCGTGGTTATTGCTACATTACTTCTGGTTTTATATTCCTCTTTCCTCCTCCACTTGAGCAACCATTCATTCATTCCCAGATCAGTCTTGGAGCTTGTTCTTGTCAACAACGCATCACTTGATTTCAAACCCACTTTCAAGAGGGAGCAAATTACCCTCCCTTCCTTAAATTCTCAAGGTCTAAAAGTTCAACCACAAAGGTGTCAACTTTCTAATTCAAACCAGAAATCAAATTCTCCAGCACAGATGGGGAAGATTGCGTGTGACACAAACCTTCCTCTCTTAAGGGTGTTCATGTATGACTTACCTCCAGAGTTTCACTTTGGGTTATTGGATTGGAAGGGGAGCGCGAACCAAACATGGCCTGATGTGAATAATCCAAAACACGTCCCTTCATATCCAGGTGGGCTTAACTTACAGCATAGTGTGGAGTACTGGCTCACTCTTGATCTTTTGTCATCAAACATTGCAAAAGTTTTGAGGCCTTGTTGTGCTATTAGAGTGCAGAACGCAAGTCAAGCAAATGTGGTTTTTGTGCCATTTTTCTCATCTTTGAGTTACAACCAACATTCCAAAATCCATGGTAAGGAAAAAGTTAGTATTAACAAAATGCTGCAAGAGAGATTGGTGCAGTTTCTAATGGGGCGGGAAGAATGGAAACGTTCTGGAGGGAGGGATCATGTTATTGTGGCCCACCATCCTAACAGTATGGTTCATGCAAGAAGAAAGTTGTGTTCTTCCATACTCGTGCTTGCAGATTTTGGTAGATACCCTTCTAAAATAGCAAATATTCAGAAGGATATAATAGCTCCATACAGGCATCTAGTAAACACTACACCAAGAGCTGAATCAGCTTCATATGAAGAACGTTCTACACTTCTATATTTCCAGGGGACAATATATAGGAAAGCTGGAGGAGCTGTTCGCCATGAACTATATTACCTCCTCAAAGATGAGAAAGATGTGCATTTTACGTTTGGAAGCATAAGAAGAAATGGGATTCGGCAGGCAAGCAAAGGCATGGCCTTATCCAAATTTTGCCTAAACATTGCTGGAGATACCCCATCCTCTAATCGCCTCTTTGACGCCATTGTGAGCCACTGTGTACCTGTGATCATCAGTGATAAAATTGAGCTACCATTTGAAGATGTTTTGGACTACTCAGAATTTAGCTTATTCGTCCGTGCCTCGGATGCTGTGAGGAAAGGCTACCTGCTGAGTCTTCTTCGTTCAATCAAGCCAGAGAAATGGACCAAGATGTGGAAAAGGTTAAAGAATATCACTCAACACTTCGAGTATCAATATCCAAGCCAGCCTAGAGATGCAGTGAATATGATTTGGGAGGAAGTTGCACATAAGATACCATCCCTACAGTTAAATTTGCACAGGAAAAATAGATACCAGAGATCTTAG 1458 0.415 MSDRNVVSPRFFMFCVVVIATLLLVLYSSFLLHLSNHSFIPRSVLELVLVNNASLDFKPTFKREQITLPSLNSQGLKVQPQRCQLSNSNQKSNSPAQMGKIACDTNLPLLRVFMYDLPPEFHFGLLDWKGSANQTWPDVNNPKHVPSYPGGLNLQHSVEYWLTLDLLSSNIAKVLRPCCAIRVQNASQANVVFVPFFSSLSYNQHSKIHGKEKVSINKMLQERLVQFLMGREEWKRSGGRDHVIVAHHPNSMVHARRKLCSSILVLADFGRYPSKIANIQKDIIAPYRHLVNTTPRAESASYEERSTLLYFQGTIYRKAGGAVRHELYYLLKDEKDVHFTFGSIRRNGIRQASKGMALSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDKIELPFEDVLDYSEFSLFVRASDAVRKGYLLSLLRSIKPEKWTKMWKRLKNITQHFEYQYPSQPRDAVNMIWEEVAHKIPSLQLNLHRKNRYQRS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00795 485 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 90 463 IPR004263 GO:0006486|GO:0016757
Vimu7g00795 485 Pfam Exostosin family 110 421 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00795 Vimu-Chr7 7925323 7927267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00795 - - gmx:100809635 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00795 7 7925323 7927267 Vimu7g00795 7 7925323 7927267 ECH