Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00777 ATGACTAAGGTGTTTTTGCTGTTATATTTTCTGTTGGAGGTCTTGTTCCTTGTTCAGGCTCTGGACAATCATAGGAAAATTGGGTTTTATGAACTGGAGAGAGAAAATTTTAAACTCAATTTGACAAATTATGGTGCTACAATCGTGTCTGTGGTAACCCCTGATAAACACGGAAAACTAGCTGATATTGTTCTTGGTTATGATTCTATTGATTCTTATAAGAATGACACAACTTATTTCGGGGCAGTGATTGGACGGGTGGCGAATAGGATTGGAGGTGCTAAATTCACTTTGTATGACAAAACCTACCACTTACCCGCAAATGATCACGGAAACACACTTCACGGTGGCACAAGAGGTTTGAGTGACGTTATATGGACAGTGGAATCTCACAAAAAACACAGTCATGTAACATTTACCTACGACAGTCCTGAAAACGAACAAGGCTTTCCTGGAAAAGTCAAAGTCAAAGTGACTTACAAGCTCGTTGGAGCACACAAACTGATTGTGAAAATGATTGCCAAGTCAGTGGACAAAGCCACACCAGTGAATCTTGCCCAGCATACTTACTGGAACCTTGGGGGACACAAGAGTGGTAACATTCTTTCTCACAATGTTCAGATCTTTGGTTCACACATCACACCCGTGGACAAGCTTCTTATTCCCACTGGCGAAATCAGATCTGTAAAGGGCACCCCGTATGATTTTCTTCAACCAAAAAAAGTTGTAACCCACATTCGTAAGCTTCCGGATCTATATGATATTAACTATGTGCTGAACAAAAGTTTCCAAAATCAGTTAACCAAGGCTGCGGTAGTGAGAGACCCTGTCTCTGGGAGGAAAATGGAGTTGTGGTCAAACCAACTTGGTATGCAGTTTTATACTAGTGGTCAGTTAAATGGTACCAAAGGCAAGGATGGGGCCATATACCACAAGTTTGCTGGCATTGCCTTGGAGACACAGGGTTTCCCAGATTCTGTGAATCACCCTTACTTTCCAACACAGATTGTGAAGCCTGGGGAGACTTACGAGCACATCATGCTTTACAGATTCACAGCTAGCTAA 1065 0.4207 MTKVFLLLYFLLEVLFLVQALDNHRKIGFYELERENFKLNLTNYGATIVSVVTPDKHGKLADIVLGYDSIDSYKNDTTYFGAVIGRVANRIGGAKFTLYDKTYHLPANDHGNTLHGGTRGLSDVIWTVESHKKHSHVTFTYDSPENEQGFPGKVKVKVTYKLVGAHKLIVKMIAKSVDKATPVNLAQHTYWNLGGHKSGNILSHNVQIFGSHITPVDKLLIPTGEIRSVKGTPYDFLQPKKVVTHIRKLPDLYDINYVLNKSFQNQLTKAAVVRDPVSGRKMELWSNQLGMQFYTSGQLNGTKGKDGAIYHKFAGIALETQGFPDSVNHPYFPTQIVKPGETYEHIMLYRFTAS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00777 354 CDD galactose_mutarotase_like 30 351 IPR047215 GO:0016853
Vimu7g00777 354 PANTHER ALDOSE-1-EPIMERASE 26 352 - -
Vimu7g00777 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
Vimu7g00777 354 Gene3D - 17 353 IPR014718 GO:0030246
Vimu7g00777 354 SUPERFAMILY Galactose mutarotase-like 19 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu7g00777 354 PIRSF GALM 17 354 IPR015443 GO:0016853|GO:0019318
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00777 Vimu-Chr7 7756493 7758175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00777 11 353 Miscellaneous Gene Families AT3G47800 57.434 2.42e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00777 K01785 - gmx:100806956 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00777 7 7756493 7758175 Vimu7g00777 7 7756493 7758175 ECH