Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00762 ATGAACCACAGAAGCTTATCCTTCCACTGGAACGAGGACCTTCTCTTCGTGGCCGGGGAGCCTCTGGAAGATTCTGTCATCCTTCTGATAGAAGACCGCACTAGCAAGGAAGTGGCTCTCCTAGGCCACATCGTGGTTCCGCTGAGCTCCATCGAGCAACGAATCGACGAGCGCCACGTGGCAGCGAAATGGTTCCCGTTAGAAGGTGGGCCCTACTGCGGGCGAGTCTTCCTGCGTCTCTGCCTTGAGGGCGGGTATCACGTTCTGGACGAAGCGGCGCACGTGTGCAGCGATTTCCGTCCTACGGCGAAGCAGTTATGGAAACCGCCGGTGGGTATTCTAGAACTGGGGATTCTGGGCGCTCGAGGGCTCCTTCCGATGAAATCAAAAGGCGGTGGAAAAGGCTCCACCGATGCCTACTGTGTGGCCAAGTACGGGAAAAAGTGGGTCCTTGGAGTGTTCGACAACTGGCGCATGTTTGCTGACGTGCCAGAAGATAGGCCCGACTGCCGTATCGGCAAGGTTCGCATACGCGTCTCTACGCTTGAGAGCAACAGGGTATACACCAATTCCTACCCCCTCCTAGTCCTCACACGAACCGGGTTGAAGAAAATGGGAGAAATCGAGTTAGCGGTTCGTTTCGCCTGCCCCTCCTTGTTGCCCGATACCTGTGCAGTTTACGGTCAGCCACTGCTTCCACGAATGCACTATCTGCGGCCGCTGGGAGTGGCGCAGCAGGAGGCGCTGCGTGGGGCCGCGACAAAGATGGTGGCGCAGTGGCTGGCCAGGTCAGAGCCACCCATGGGGCAGGAGGTAGTTCGGTACATGTTGGATGCAGACTCGCACGTGTGGAGCATGAGGAAGAGCAAAGCGAATTGGTTCAGAATCGTGGCGGTTTTGGCTTGGGCCATTGGTTTGGCGAAATGGTTGGATGATATAAGAAGGTGGAAGAACCCTGTTACCACGGTGCTGCTCCACATTCTTTACTTAGTGCTTGTTTGGTATCCAGATTTGATTGTCCCCACAGGGTTCTTATACGTGGTCTTAATTGGGATATGGTATTACCGGTTCAGGCCGAAAATACCGGCTGGGATGGATACCCGGTTGTCTCAGGCGGAAGCGGTTGACCCGGATGAGTTGGACGAGGAATTTGACACCATGCCAAGTTCTAAACCACCCGATATAATCCGAATGCGGTATGATAGGTTAAGAATGCTGGGAGCTCGAGTCCAAACGGTGTTGGGTGATTTTGCAACCCAGGGAGAGAGGGTTCAAGCCTTGGTTAGTTGGAGAGATCCCAGGGCTACCAAGTTGTTCATTGGAGTATGTCTTGCCATAACTGTTACACTCTATGCAATGCCGCCAAAAATGGTGGCCGTCGCCCTAGGCTTTTATTACCTCCGCCACCCCATGTTCAGGAACCCAATGCCCTCCGCCACCTTGAACTTTTTCCGTCGACTTCCCAGCCTCTCCGATCGCTTGATGTAG 1488 0.545 MNHRSLSFHWNEDLLFVAGEPLEDSVILLIEDRTSKEVALLGHIVVPLSSIEQRIDERHVAAKWFPLEGGPYCGRVFLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKSKGGGKGSTDAYCVAKYGKKWVLGVFDNWRMFADVPEDRPDCRIGKVRIRVSTLESNRVYTNSYPLLVLTRTGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPMGQEVVRYMLDADSHVWSMRKSKANWFRIVAVLAWAIGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDIIRMRYDRLRMLGARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLAITVTLYAMPPKMVAVALGFYYLRHPMFRNPMPSATLNFFRRLPSLSDRLM 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00762 495 Pfam Plant phosphoribosyltransferase C-terminal 340 495 IPR013583 -
Vimu7g00762 495 Pfam C2 domain 9 67 IPR000008 -
Vimu7g00762 495 Pfam C2 domain 152 194 IPR000008 -
Vimu7g00762 495 Pfam C2 domain 112 149 IPR000008 -
Vimu7g00762 495 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 151 495 IPR047259 -
Vimu7g00762 495 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 103 IPR035892 -
Vimu7g00762 495 Gene3D C2 domain 1 84 IPR035892 -
Vimu7g00762 495 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 112 235 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00762 Vimu-Chr7 7607558 7609132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00762 1 495 Lipid Metabolism Gene Families AT1G74720 75.046 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00762 - - gmx:100783882 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00762 7 7607558 7609132 Vimu7g00762 7 7607558 7609132 ECH