Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00738 ATGAAGATGATGAGTGAGATGTGGACAACAATGGGGTCAACTTTAGCTAGCTTCATGTTCTTGTGGACGATCATGAGGCAGTACTGTCCCTACGGAGTTCAACGTTTCTTGGAGAAGTACACACATAGGATCATGAGTTACTTTTCTCCTTATATTCGAATCTCCTTCCATGAGTACATGGGAGACAGGCTAAAGCGCAGTGAGGCCTATGCGGCTGTGGAGGCATATCTCAGTGCCAACACATCAAAGAGTGCTAAAAGGCTCAAAGCTGAACTGGGTAAGGATAGCAGCAACTTGGTTTTGACTATGGATGAGTATGAAAGGGTAACGGATGAGCACAAGGGTGTCAAAGTTTGGTGGGTCTCTAACAAAGTGATGTCACCAACAAGGTCTTCAATGTCCTATTATCCAGAACAGGAGAGAAGGTTCTACAAGCTCACTTTTCACAACAAGTATAGAGACCTGATAACTGAGTCCTATTTGGAGCATGTGATGAGGGAGGGGAAGGAGATTCGTCTGAGGAACAGGCAGAGGAAGTTGTACACTAATAGCCCTGGCTATAAGTGGCCAAGTTACAAGCAGACTATGTGGAGCCACATTGTGTTTGAGCACCCTGCTACTTTTGAAACAATGGCCTTGGAGCCTGAGAAGAAAAAGGAGATCATTGAGGATTTGATCACTTTCAGCAAGAGCAAGGATTTCTATGCAAGGATTGGGAAGGCATGGAAAAGGGGTTACCTTCTTCATGGCCCTCCTGGGACAGGCAAGTCCACTATGATTGCTGCAATGGCTAATTTGTTGGCCTATGATGTCTATGACTTGGAGCTCACTGCAGTGAAGGACAACACAGAGTTGAGGAAGCTTCTGATTGAGACAACCAGTAAGTCTATAATTGTTATTGAAGACATTGATTGCTCTCTTGATCTTACAGGGCAGAGGAAGAAGAAGGCAGATAAGTTGTCGGACGAGGAGACTGATAAGGATGTTGTTGGAAGGAAAGAGGCCAAGGAAGAAGGAGGGAGTGGAAGCAAAGTCACACTCTCAGGGCTGTTGAATTTCATTGATGGGATTTGGTCTGCTTGTGGAGGGGAGAGGCTGATTGTGTTCACAACCAATTATGTGGAGAAACTTGATCCTGCACTCATTAGAAGGGGGAGAATGGACAAACACATTCAACTCTCCTATTGCACTTTTGATGGCTTTAAAGTGCTTGCAAATAATTACTTGAAGCTACAAACTCATCCATTGTTTGACACCATCAAGAGGCTAATAGAAGAGGCCAACATCACCCCAGCTGATGTTGCTGAAAACCTCATGCCCAAGTCCCCAATGGATGATCCTCACAAGTGCCTCTCCACCTTGATTCAAGCACTTGAGAAAGCTGCAAAAGCTGAGGAGCTGGAGCAGAATTGTCCCATTCAACATGAGCAACTTCTTCAACAAAATGGCTCCATTAAGGAAAATGGTGAGCTTCCACCTGACAAAGCAGTGAATCAATGCCAGCTATGA 1509 0.4493 MKMMSEMWTTMGSTLASFMFLWTIMRQYCPYGVQRFLEKYTHRIMSYFSPYIRISFHEYMGDRLKRSEAYAAVEAYLSANTSKSAKRLKAELGKDSSNLVLTMDEYERVTDEHKGVKVWWVSNKVMSPTRSSMSYYPEQERRFYKLTFHNKYRDLITESYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMALEPEKKKEIIEDLITFSKSKDFYARIGKAWKRGYLLHGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKADKLSDEETDKDVVGRKEAKEEGGSGSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIQLSYCTFDGFKVLANNYLKLQTHPLFDTIKRLIEEANITPADVAENLMPKSPMDDPHKCLSTLIQALEKAAKAEELEQNCPIQHEQLLQQNGSIKENGELPPDKAVNQCQL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00738 502 Gene3D - 202 390 IPR027417 -
Vimu7g00738 502 PANTHER BCS1 AAA-TYPE ATPASE 10 466 - -
Vimu7g00738 502 SMART AAA_5 242 397 IPR003593 GO:0016887
Vimu7g00738 502 FunFam AAA-ATPase ASD, mitochondrial 198 391 - -
Vimu7g00738 502 Pfam ATPase family associated with various cellular activities (AAA) 247 394 IPR003959 GO:0005524|GO:0016887
Vimu7g00738 502 Gene3D - 391 463 - -
Vimu7g00738 502 CDD RecA-like_BCS1 221 391 - -
Vimu7g00738 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 443 IPR027417 -
Vimu7g00738 502 ProSitePatterns AAA-protein family signature. 365 384 IPR003960 GO:0005524|GO:0016887
Vimu7g00738 502 Pfam Domain associated at C-terminal with AAA 30 122 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00738 Vimu-Chr7 7381198 7382706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00738 207 420 Miscellaneous Gene Families AT5G58870 27.477 8.87e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00738 - - gmx:100798176 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00738 7 7381198 7382706 Vimu7g00738 7 7381198 7382706 ECH