Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00694 ATGATGAGTGATTATACAGTGGAGACGATAAACGATGGACTTAGTGAATTCAATGTTGAGTTTCATGGTCCAAAAGAAAGTCTTTATGAATGTGGTGTCTGGAAAATTCGTGTTGAGCTTCCTGATGCTTACCCATATAAATCCCCTTCTATTGGCTTTGTGAACAAAATATTCCATCCTAATGTCGATGAGTTGAGTATCAAGTCACTGAAACAACTTGCTACTGTTTGTGCACAAGTGGATCTGACTGATTCTGCTTTGCACATTTCATCAACTGCAGATCTGGCTCTGTATGCTTGGATGTCATTAACCAATCTTGGAGCCCAATATCTTCTAAATGTCTTTGAAGTTTTTCTTCCACAACTCCTGCTTTATCCAAATGCTTCAGATCCTCTCAATGGCGATGCAGCATCGTTAATGATGAAGGATAAAAAGTTGTATGACCAGAAAGTTAAAGAGTACTGTGAGCGGTATGCTAAGAAGGAAAACATTAGCAACTCTACAGCTGGTGAGGAGAGTGGAGATGAGGAAGACATCAGTGAAGAAGACAGTGGATCTAGTGATGATGACATTCCTGGTCATGCTGATCCTTAA 594 0.399 MMSDYTVETINDGLSEFNVEFHGPKESLYECGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSIKSLKQLATVCAQVDLTDSALHISSTADLALYAWMSLTNLGAQYLLNVFEVFLPQLLLYPNASDPLNGDAASLMMKDKKLYDQKVKEYCERYAKKENISNSTAGEESGDEEDISEEDSGSSDDDIPGHADP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00694 197 MobiDBLite consensus disorder prediction 162 197 - -
Vimu7g00694 197 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 160 IPR000608 -
Vimu7g00694 197 SUPERFAMILY UBC-like 3 162 IPR016135 -
Vimu7g00694 197 SMART ubc_7 1 160 - -
Vimu7g00694 197 Pfam Ubiquitin-conjugating enzyme 5 154 IPR000608 -
Vimu7g00694 197 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 14 148 - -
Vimu7g00694 197 CDD UBCc 1 155 IPR000608 -
Vimu7g00694 197 Gene3D Ubiquitin Conjugating Enzyme 1 173 IPR016135 -
Vimu7g00694 197 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00694 Vimu-Chr7 6959494 6961663 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00694 K10576 - gmx:100790685 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00694 7 6959494 6961663 Vimu7g00694 7 6959494 6961663 ECH