Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00690 ATGCGATCCTCTACAATGCGATGCTTCACCATATTCACCCTGTTACTTCTCCTTTCGCAGGGACACGCAGCGTCCCATAAGCTTCTTTCTTCTCCATTTTCAACCGCTCTCGAAACCCTCCAAAAACAACTCGGCTACACCTTTAAGAGCATTGATCTTCTCCGTCGCGCCATGACCCACGCCTCCTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTGGGCGCCGCCGTCATCGAAACTTCCGTCTCTTTTCACTTATTATCTAAAGACGTTGATATTTCTCCTAAAGAGCTGAACCGTCGATTGTCCCAAATCACCAGCGTCGACTCTTCCTGCGCCGTCGACGGAACTCGATTAGGGTTGCAAAAGATCGTTCGCGTCTCGCCCAAAACCAATTCCTCCGCCCCTGCCGTCGTTTGCGGCGCGTTTCGAGCAATCTTCGCTGCCATTTCTATTGACACCGGCAAGTCCGATGATGCAGGTAACGTCTTCTGGAACCTTCATGGCGGCGACCTAGGATCTGCTGTGGCTCTTTGA 540 0.513 MRSSTMRCFTIFTLLLLLSQGHAASHKLLSSPFSTALETLQKQLGYTFKSIDLLRRAMTHASFSEENNKAFAILGAAVIETSVSFHLLSKDVDISPKELNRRLSQITSVDSSCAVDGTRLGLQKIVRVSPKTNSSAPAVVCGAFRAIFAAISIDTGKSDDAGNVFWNLHGGDLGSAVAL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00690 179 SMART riboneu5 52 178 IPR000999 GO:0004525|GO:0006396
Vimu7g00690 179 Gene3D Ribonuclease III domain 35 173 IPR036389 GO:0004525|GO:0006396
Vimu7g00690 179 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 35 171 - -
Vimu7g00690 179 SUPERFAMILY RNase III domain-like 31 164 IPR036389 GO:0004525|GO:0006396
Vimu7g00690 179 CDD RIBOc 52 159 IPR000999 GO:0004525|GO:0006396
Vimu7g00690 179 ProSiteProfiles Ribonuclease III family domain profile. 37 156 IPR000999 GO:0004525|GO:0006396
Vimu7g00690 179 PANTHER RIBONUCLEASE III 28 156 IPR011907 GO:0003723|GO:0004525|GO:0006364
Vimu7g00690 179 Pfam Ribonuclease-III-like 52 158 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00690 - - gmx:100527745 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00690 7 6937903 6938514 Vimu7g00690 7 6937903 6938514 ECH