Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00683 ATGGTTAACTCCGAAGCAGTAAGAACTGCAGTTGGAATAATTGGTTTGTTCGCCAAAATCTTACACCATTTCATACCGACATTTATTTCGATATTTAAGGCAAAATCAGTACAAAATTTTAGGCCAGATCCATACATTGCAACCATATTGAATTGTGGAGTGTGGGCATTCTACGGACTGCCCTTCGTAACCAAAGATAACACTCTTGTCATCACAATTAATGGATTTGGCTTCTTCCTTGAAATCTTCTACGCTCTCGTCTTCTTTATTTACTCAACCTGGAGCAAGAGGAGGAAGATCATGCTCATATTCCTTGGTGAAATAATCTTCCTTGCGTTACTGGTGTTTTTGGTGATGACCTTTGTTCACACCCCCAACAAAAGAAAGGTGATTGTTGGACCTATCTGCATATTCTTCAACATCCTTATGTATTTTTCACCCTTGACTGTAATGGTACTATGGTTTGGTTATCATCTATTTTTGGTTTCATTCGAAAACCAAAAAAACAATGAAAATGAGCAGACACGAGTGATTCGAACCAAGAGCGTGAAATACATGCCTTTCTTACTTTCATTCGCCAACTTCGCCAATGGAATTGTGTGGACAACCTATGCCTTGCTTAAGTGGGATCCATTCATCGTGATTCCAAATAGTTTGGGAACACTTTCTGGGTTGGTACAGCTCATCCTCTACATTGTTTACTATCGAACAACCAACTGGGATGAAGACGACGAACCCGCTAACGTCATATGA 753 0.3971 MVNSEAVRTAVGIIGLFAKILHHFIPTFISIFKAKSVQNFRPDPYIATILNCGVWAFYGLPFVTKDNTLVITINGFGFFLEIFYALVFFIYSTWSKRRKIMLIFLGEIIFLALLVFLVMTFVHTPNKRKVIVGPICIFFNILMYFSPLTVMVLWFGYHLFLVSFENQKNNENEQTRVIRTKSVKYMPFLLSFANFANGIVWTTYALLKWDPFIVIPNSLGTLSGLVQLILYIVYYRTTNWDEDDEPANVI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00683 250 PANTHER RAG1-ACTIVATING PROTEIN 1 20 240 IPR047664 -
Vimu7g00683 250 Gene3D - 4 96 - -
Vimu7g00683 250 FunFam Bidirectional sugar transporter SWEET 172 244 - -
Vimu7g00683 250 Pfam Sugar efflux transporter for intercellular exchange 176 237 IPR004316 GO:0016020
Vimu7g00683 250 Pfam Sugar efflux transporter for intercellular exchange 11 93 IPR004316 GO:0016020
Vimu7g00683 250 Gene3D - 174 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00683 Vimu-Chr7 6887367 6888678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00683 1 215 Miscellaneous Gene Families AT5G62850 47.005 9.21e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00683 K15382 - gmx:100810948 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00683 7 6887367 6888678 Vimu7g00683 7 6887367 6888678 ECH