Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00655 ATGGTGAACGCGAGTGACGCTGGCGTCGAAGCCCTACGGCGCCTGAAAGCGACGGATACACATTTATGGTTGGCGCCGAACGTGGAGCTGTCGGAAGCTGCTCGTACGGCGTCCCAATACTTATTTTCTACCCTAAAACCATTTTCCCCTAAAACGCCACTGGATCAACTCCTCGTGGAAGGTTTCGACGCTGAACAGATATGGCAACAAATCGACCTCCAATCACAGCCTCTGTTATCCACCCTGCGCCGCCGATTGAAGCAGCTGGCTGAAAATCCTGAAGGGATTTCCCAGCTGAAGGTTCTTTCGGAAAGTGGGAACAAGGTGGAGGAAAAGAGTAGTGTCGAGTGGGAGGGAGATAGTGACGGTTTTGACGAGGAGTTGGATGAAGAAGAGGAAGAGGAAGAGGAAGGAGACGAGGACGAAGAAGAGCAGGGAGAAGAAGAAGGAATGGAAGAGGATATAGAAGATGAAGTGGAAGACGAAGAGGATAATGAAGAAGGCGGTGGTATTGAGGATAAATTCTTGAAAATAGATGAATTGGCGAAGTACTTAGATAAGGAGGAAGAGGATTTTCAGAATGGTGAGGCAGGCAGAGAAGGCGAGGAGGAAGATGATGACGAGGAAAGTGACGAGGATGATGATTTTGGGTCTGGTGACGAAGATGATGTAGACGAAGAAGCAGAGGATATGGAAAATGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAGGGGCTCAAAAAGAAAAGCTCAAGAAAAAGGGACTGCATCTGCCCACGAAAAGCAGCTGGAAAAAATTCAATCCAAGATAGAGCAGATGGAGAAAGCTAACATAGAGCCAAAAACATGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCCAAAAATAGTGCATTGGAAGTTGATCTAGACTTTGAGCACAATGTGAGGCCTACTCCTGTAATCACTGAGGAAGTTACAGCTTCTATCGAGGATATGATCAAGAATAGGATTATTGAGGGGCTTTTTAATGATGTACAAAGGCTTCCTAAATTGCCATCTAAGGCGCCTCGGGAAGTTAAAGAGTTGGATGATAGTAAAAGCAAGCAGGGTCTTGCAGAAATTTACGAGCAAGAATATGTTCAGAAGACAGACCCCACATCTGCTCCATTGTCATTCAAAGATGAACAAAAGAATGAGGCTACCATGCTGTTCAAGAGACTCTGTCTGAAGCTGGATGCCCTATCTCATTTTAACTTTGCCCCAAAACCTGTCATAGAGGACATGTCTATTCAAGTTAATGTGCCTGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAGATGCTGCTATGTTGGCTCCTGAGGAGGTGTTTGATGGCAAGGGTGATATCAAGGAAGAAGTAGAGCTTACACAGGCAGAAAGGAAGAGAAGGAGAGCTAACAAGAAAAGAAAATTTAAAGAAGAGGCAGTAAAAAAGACAAAAAAGAAGGCGCAAGAAGGTGCTATTCATAGCCAAGTTAATGCGCTATTGGTATGCATAGCTGATATGTTGTATTGTTCCGCACCCCTTGCTATGGCTTACTGTTGGAGCTTTTTGCTTTTGATATTTCCGCTTGTAAAGCTTTTTGACTGGCAAATATTTGATTCTCTTGAATTCCTTGTATAG 1662 0.4458 MVNASDAGVEALRRLKATDTHLWLAPNVELSEAARTASQYLFSTLKPFSPKTPLDQLLVEGFDAEQIWQQIDLQSQPLLSTLRRRLKQLAENPEGISQLKVLSESGNKVEEKSSVEWEGDSDGFDEELDEEEEEEEEGDEDEEEQGEEEGMEEDIEDEVEDEEDNEEGGGIEDKFLKIDELAKYLDKEEEDFQNGEAGREGEEEDDDEESDEDDDFGSGDEDDVDEEAEDMENARYEDFFGGKKERGSKRKAQEKGTASAHEKQLEKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPTPVITEEVTASIEDMIKNRIIEGLFNDVQRLPKLPSKAPREVKELDDSKSKQGLAEIYEQEYVQKTDPTSAPLSFKDEQKNEATMLFKRLCLKLDALSHFNFAPKPVIEDMSIQVNVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEEVELTQAERKRRRANKKRKFKEEAVKKTKKKAQEGAIHSQVNALLVCIADMLYCSAPLAMAYCWSFLLLIFPLVKLFDWQIFDSLEFLV 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00655 553 PIRSF snoRNP_Mpp10 7 257 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vimu7g00655 553 PIRSF snoRNP_Mpp10 208 506 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vimu7g00655 553 MobiDBLite consensus disorder prediction 195 233 - -
Vimu7g00655 553 Pfam Mpp10 protein 50 255 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vimu7g00655 553 Pfam Mpp10 protein 249 492 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vimu7g00655 553 Coils Coil 468 495 - -
Vimu7g00655 553 MobiDBLite consensus disorder prediction 105 119 - -
Vimu7g00655 553 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 245 497 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vimu7g00655 553 Coils Coil 258 281 - -
Vimu7g00655 553 Coils Coil 124 144 - -
Vimu7g00655 553 MobiDBLite consensus disorder prediction 120 169 - -
Vimu7g00655 553 MobiDBLite consensus disorder prediction 170 194 - -
Vimu7g00655 553 MobiDBLite consensus disorder prediction 101 267 - -
Vimu7g00655 553 MobiDBLite consensus disorder prediction 234 267 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00655 K14559 - gmx:100817724 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00655 7 6562583 6571081 Vimu7g00655 7 6562583 6571081 ECH