Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00647 ATGGCGATTGTGCCCGTGAACCTCGTTTGGACCGTTTCCTCGGTTTTTGAAGATGTTGCGCATGTCATTGTTGAGGAGCGCTCGTTGTTGAAAGTTTGTCTTGCTCTTGTTACCTCTGTTTTTGGATCTCTGGATTGGATGACCGTGTGGCGGCAACTAGACTATGACTTCAAGCATGTTGAGTGGGGAACGGAGGTATGTTTAAATTTGAGTGCTTTTGAAGTCACTAAAGTGAACTGGTGGTCCTGTGTTGTGATAAGGGTTTCGGAAGTAAATCGAATGGATTTTTTCCCCTTAAGATATGGCAATTTGGTTCCCTTATGGGCCTCCTCTTCCAGAAGAGGTGGTATGACTGTTTTAGGGAAAGTTGCAGTCCCAAAACCTATCAACTTACCCAGTCAGAGGTTAGAAAATCATGGTCTGGACCCAAACGTGGAGATTGTTCCCAAGGGTACACTCAGCTGGGGTAGTAGATCATCATCTTCTACATCTAATGCATGGGGTTCTTCTTCTCTGTCCCCCAAAACTGATGGAGGTGCTAGTTCGCCCAGTCACCTCAGTGCCCGTCCATCATCTGGTGGAAGTGGCACACGACCTTCTACTGCTGGAAGTGATAGGGTTCTTGAGCCTACTGCTAATTCATGGGGGACGAATTCTCGGCCTTCATCGGCATCTGGGGTACTGTCAAAAACTCAGTCTTCATTGACATCATTGCGTCCTCGGAGTGCAGAAACTAGACCTGGCAGCTCTCAGCTATCCCGATTTGCTGAACCCTTGACTGAAAATTCAGGTGCCTGGAATGCTGCTAGGACTACAGAAAAACTGGGTGTTACACAACCCAAGAATGAAGAATTTTCTCTAAGCTCTGGAGACTTTCCAACCCTTGGTTCTGATAAAGATAAGTCTGTTCTGAATTCTGAGCTTCAAGTAAGTGGTCCCATATTGCATGGTGAGTCCTGTTCAAGTCCTTTGCCATCATCACTCAATATTGTTACTACTGATAATATAGATTCCAGTTGGCCCATTGCTTTCCAAAAACGTACTCATTCCCTCATCGCTTTCCAAAAACTTCCTCTACCACTTGGGCAGAAAACAATTGGTTGTAGATGGGTGTATGGCTTTAAAGTCGGGCCAAATGGTGAGGTTACAATGATATCCCAAATGACAATTGTACATCGCTTTGCTGTGGCAGCTCTTTACCATTGGCCTCTTCATCGGTTGGATATTAAGAATACATTTTTTATGGTGATTTGGTGGAACCTTTACATGGGGAAACCTCCTAGTTTTGTTGATAGAGGGGAGTTAGGATTGCTAAAGCATCATTTGTGCAAACACTTTCAAACCCAAGATCTTGGAAATCTAGACAACTTCCTAGGCATTGAAGTGTCTCAATCAAAAGAAGAAATAAGAATGATTGATTGTAAACTTGTTGATAATTCTGTGGATCCAAATAAGAAGTTAACAAAGCTCCTTGCATTGAACATACCATTCTCAGTATCTCAAAATAGGTCTAGGACAGGGACTACTGCTCACCCTGACTCCTCTTCTGAACTCAGGAAAGAGATAAATGAGACTCCTGGTTTTTGTTCTTTGTCTGATGCTCTTTTTTTGTTTTCAGAAGATGATCATGTAAATGCAAATATTAAGGGTGAAAGTGTAAATTCTTGGAGGAGAGATTATCAGGTTTATAACGAGGAAGGTGTGAGGCCAGGCATAGAGAAATGGCAGGGAAACTCCCAGCTTTATCCTAATGCTGGTATTCCTCCTCAACACTATGAAGCTTGGTATGGTCCTCCAGTAAATAATCCTCAGGGCTGTGTTTGGTTCAGGGGTCCTCCCAGTGGTCCCCCATTTGGAAATCCTGTTACTCCAAGTGGCTTTCCAATGGAACCATTTCCATATTACCGTCCACATATGCCCCCTGCTGGTCTTGCAAACCCTCCCCCAGTTCCCCCCACTGGAGCTGGACCACGAGGGCACCATAAGAATGGAGATGTCTACAGGCCTCATATAGCCGATGCCTTTATTCGTCCAGGCATTCCTATGAGACCTGGGTTTTATCCCGGTTCAATGGCTTATGAGGGATATTACAGTCCTCCAATGGGCTATTGCAATGCAAACGAGCGAGATGTTCCTTTCATGGGAATGCCTTCTGGACCTCCTGTCTTTAATAGGTACTCAAATCAAAATCCTCCTGAACCTGGCAATGCACATGGTAGGTCTGCTGGATATGGTAATACTGGGAAGCAATTGACTTCAGAGCAAGTGGAATCTGGCCATCCTCCTGATACTGGTGGACCATACAGAGTTCTTCTTAAGCAGCAGCCCGAATCAGATGGGAAAAATAAATCAACAAATTTTGAGGATTCAGAGAAAACCAATGCATTATATGCTGATGGTCGGAGCCAACCTAGAATGACTGTTTGGGAGAATGAGCCGAGATCAAACTACAGAAAGAACGAAGATATGGATCTGAGGACGATTGCCCGTGGTGAAGTTTTCTCTCAGACTTCAGAAAATCAAGTATCAAGTTCTTCTGTCATTAAGGGCAAATCTTCTGAAAGTTCAGGAAACATAAAACTTGATGATAATTCAGCGAGGAAATTGGAGGCTGTTGCCTCAGATATGCTAGAAATCTCCCCTAAACCATCTGCTCCAAAAGATGCCAGTCTAATTCAAAAGATCGAGGGTTTAAATGCAAAGGCTAGGGATAATTCATCTGCTAGAATTAGAGAGGAGCAAAGGAGTAAATTTCATACCAGTAATGCTGTGATAGACCATGTGGAAAATACTGTTGGTGCTGATGTGTTTCCAGCACGTAGTCATGCCACAGAAATCATAAATCCTGCCCATCATGAAATGGGTGCTCCTGGTGCAGGAAAGAATTTTGAATCCTTGTCTTCCAGTGGAACTGCCACATCCAGGCAATCTGCTCATGGAATGCAAGGTAGAGGTGATCATCGTAACAAAGGAAGATCAAACAATCTAGATGCTGATGGTTGGCGAAAGAAATCTGTGGTTGAAGATTCTTTAGCCTCATCAGGTGTACAGTTAGAAGCATCTCATGTTCTTGTGGGTGATCATCAAATATCTGTTCAGACCTATGACAGGTCCGGATCCTATAACCAAGCAAGGCACTTTGGAGAATCTGTTCAAACCTGGTCTGATTCTGGTGACAGCCATGCACAGCGTGCCAAAATGAAAGAGTTAGCCAAGCAACGGACTAGACAACTGCAGGAGGAAGAGGAGGAACGGACAAGAAAGCAAAAGGCAAAAGCTCTTGCTAAGTTGGATGAGTTAAACAAGCGATCTCAAGCAGGAGATGGACCAACTCAGAAAGATTATATTACAAATCCTCAAATGCAGGAAGAAGAGGAGGAATGGACAAGAAAGCAAAAGGCTAATGCTTTTGCAAAGTTGGATGAGTTAAACAAGCAATCTCAAGCAGGTGATGGCTCAACTCAGAAAGAGTATGTTACAAATCCTGCCATCCATAATAAGCCAGAGGAGTTGCAACCTTCTGAGTCAAAAACTACAGCTGTCAATTCTGCTGTAAATTGTAATGCCATGTGTCAGGTAAATGAACCCAGCATTAGTAGAGTGGAAAAATCACCAGTCTTGCTTGTCGAACCAACTGTTGAGACACTTAAAAGTTCTGTCCAAGAGCCTATTCTGAAGCAGAATCAAGTTGTGGCCCTGCATCATGATATTAATAATGCTGATGCTACTAATCCCTTGCATGCTCATAACAATGTTGCCTCAAAGCATAAGCGAATGAGCTATAAACAGAAGCAAAATCTTCCTTTTGAGAAAACATCAAGTGACAAAATTGTCTCTACCACCTCAACTGCCCTGAAAGTTGAGAATGAGGCAAGGATTGATGTTTCTCTCTCTTCTGGTGATGTTACAAACGAAATTGGTTCAGCCTGTGGCTCTGACTTCAATTCAGCTGCTGTGGTTGAGTCTTCTGCAAACCCAAAAAAGAAGAATATTAGGAATAGTAAAAACAAACAGAAACATGAAGAAAGTTCAACTCAGGCTGTACTACCAATACCAAAAGAAACCAATCTTTCCAAAAGCTCGGTTGAAGGTTACAAGTCCAAGGCTTCTGACTTTGAGTTAGAACAGGGTGTACTTCAACCGGCGCCCCTATCTAAAGATCCAAATCCGTTTCCAGAGCAACACAGATATTCATCAAATGAGGAATCCCATGGTAGACAGAATAGCCAGTGGAAATCACAGCATTCTCGTAGGTTGCCAAGAAATATGCAGACCAATAGACCGGCAGAGAAATCCCATGGGACTGATGCTGTGATGTGGGCACCCGTTAAACCACAGAACAAGAGTGAGGTCATGGATGAATTAGTGGATAAAAGTAAAACTGAGGCAGTTAATCCTGTAAAGAATGAGGAGCAGGTGCATAATTCAAAAAATAAGAGGGCAGAAATGGAGAGATATATTCCAAAACCTGTTGCAAAAGAAATGGCTCAGCAAGGAAATATTGCACAGGTAGCTTCATCGAGCAATCAGTCTCTTACTAATGATAGCATGGGGAGAGTTGATTCCGGGTCACAGGGCCCTCAAGTCATTCAGCATACTAATACAGTTGTTGGAAAAATGGGTTCTGGGATGGAGTCTAAAATTAGAGATGGCAGGCATAATAAGCAGGGAAAAGCACATGGGTCGTGGCGGCAACGAAATATAACTGAATCAACTAATGTGCATGATGAACTGGACCATGATTCAAACTCTGAACCAAATGTTCAGAAACCAACAGAGCATTATCATGGTCACAAGTCTGAAGTAAGCTTTGTGAAAGGAGGGCAAACCAAACACTTCAGTGACACTGGTGAAATTGATGGTTCTAACAATTCTAACTCTAATGATTCGGCTGCTTGGGCTTCAGCTCCTGTTAAAGATCATGCTGCAACAGGCAGAGGGAGGCGGGCCCCTTTCAGAGGACACAAGGGCGCAGGAGGGAACCGTGAAGTTGATAACAAAAGAAATTCTTGGGAGGCAGACAAAGTTGAAACCCTTATTTCATCTTCTGAACATGGTCAACCAGATATTGGGATGGCTTCTAAAGAAAATCGAGGTGTGGGTGAACGTTTGATGTCTCAGTGGCAACCTAAATCTCAAGCATCTAGTAATCACAGAGGAAATATATCAAGTGACCAGAATGTTAGCTCGGTAGTTGTTGGAGGTAACAAAACGGATCCCACCCACGACGGGGAATCTCTTCCAGTGAGCCGTGGCAAGAGTTCCAATGCTCACGTCTCACAGCCTTTCTATGATCAACCAATCTCTGAGAAAAGCAAGGTTGGGGAAGCTCCCCATTTTATTAACCAAGAGGGTAAGAAAGAGAGAAGACATGCTCCATCAAAAAGGCAACACTACTCCCCGAATCTGGCTTCTGTTACCTCAATTGAGCAGGCTCCAACAGGTCCAGATCTTTTGCAGGACCAACGCCCATCGTCTGGGTCTGGAAAAAATGTGAACCAAAATCGGTTTCGAAGAGGACATGAATCACATGGAAATTTGAAGCTACCAACCCAGGATAATCCACACATCACGAGTATCACGCTCTTGGCGCATATGATGATGGAAAATCGGACAACTTTGAAAGACCTAAAAATGGTAGCCATGGTGAAAGAAGATTCAGGGAGAGAGGTCCAACTCATTCACGCCGAGGTGGGGGTAACTCTTATGGACGCCAGGGTGGTTTTGAATCTTATGATTAGACATGCTGAGTTAGTCAGTTGTGGAGATACTTTCGTAAGGCAGGCTAGGAGCGATGAAGATGGTGTCCCCGTTTTTGTGGGGGCTGGGGGCATAAAAGGCGACGAAGATATGAAGGCTTTGTTGCTTGCTGAGGAGGAACGTTTTTAA 5889 0.4373 MAIVPVNLVWTVSSVFEDVAHVIVEERSLLKVCLALVTSVFGSLDWMTVWRQLDYDFKHVEWGTEVCLNLSAFEVTKVNWWSCVVIRVSEVNRMDFFPLRYGNLVPLWASSSRRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGSRSSSSTSNAWGSSSLSPKTDGGASSPSHLSARPSSGGSGTRPSTAGSDRVLEPTANSWGTNSRPSSASGVLSKTQSSLTSLRPRSAETRPGSSQLSRFAEPLTENSGAWNAARTTEKLGVTQPKNEEFSLSSGDFPTLGSDKDKSVLNSELQVSGPILHGESCSSPLPSSLNIVTTDNIDSSWPIAFQKRTHSLIAFQKLPLPLGQKTIGCRWVYGFKVGPNGEVTMISQMTIVHRFAVAALYHWPLHRLDIKNTFFMVIWWNLYMGKPPSFVDRGELGLLKHHLCKHFQTQDLGNLDNFLGIEVSQSKEEIRMIDCKLVDNSVDPNKKLTKLLALNIPFSVSQNRSRTGTTAHPDSSSELRKEINETPGFCSLSDALFLFSEDDHVNANIKGESVNSWRRDYQVYNEEGVRPGIEKWQGNSQLYPNAGIPPQHYEAWYGPPVNNPQGCVWFRGPPSGPPFGNPVTPSGFPMEPFPYYRPHMPPAGLANPPPVPPTGAGPRGHHKNGDVYRPHIADAFIRPGIPMRPGFYPGSMAYEGYYSPPMGYCNANERDVPFMGMPSGPPVFNRYSNQNPPEPGNAHGRSAGYGNTGKQLTSEQVESGHPPDTGGPYRVLLKQQPESDGKNKSTNFEDSEKTNALYADGRSQPRMTVWENEPRSNYRKNEDMDLRTIARGEVFSQTSENQVSSSSVIKGKSSESSGNIKLDDNSARKLEAVASDMLEISPKPSAPKDASLIQKIEGLNAKARDNSSARIREEQRSKFHTSNAVIDHVENTVGADVFPARSHATEIINPAHHEMGAPGAGKNFESLSSSGTATSRQSAHGMQGRGDHRNKGRSNNLDADGWRKKSVVEDSLASSGVQLEASHVLVGDHQISVQTYDRSGSYNQARHFGESVQTWSDSGDSHAQRAKMKELAKQRTRQLQEEEEERTRKQKAKALAKLDELNKRSQAGDGPTQKDYITNPQMQEEEEEWTRKQKANAFAKLDELNKQSQAGDGSTQKEYVTNPAIHNKPEELQPSESKTTAVNSAVNCNAMCQVNEPSISRVEKSPVLLVEPTVETLKSSVQEPILKQNQVVALHHDINNADATNPLHAHNNVASKHKRMSYKQKQNLPFEKTSSDKIVSTTSTALKVENEARIDVSLSSGDVTNEIGSACGSDFNSAAVVESSANPKKKNIRNSKNKQKHEESSTQAVLPIPKETNLSKSSVEGYKSKASDFELEQGVLQPAPLSKDPNPFPEQHRYSSNEESHGRQNSQWKSQHSRRLPRNMQTNRPAEKSHGTDAVMWAPVKPQNKSEVMDELVDKSKTEAVNPVKNEEQVHNSKNKRAEMERYIPKPVAKEMAQQGNIAQVASSSNQSLTNDSMGRVDSGSQGPQVIQHTNTVVGKMGSGMESKIRDGRHNKQGKAHGSWRQRNITESTNVHDELDHDSNSEPNVQKPTEHYHGHKSEVSFVKGGQTKHFSDTGEIDGSNNSNSNDSAAWASAPVKDHAATGRGRRAPFRGHKGAGGNREVDNKRNSWEADKVETLISSSEHGQPDIGMASKENRGVGERLMSQWQPKSQASSNHRGNISSDQNVSSVVVGGNKTDPTHDGESLPVSRGKSSNAHVSQPFYDQPISEKSKVGEAPHFINQEGKKERRHAPSKRQHYSPNLASVTSIEQAPTGPDLLQDQRPSSGSGKNVNQNRFRRGHESHGNLKLPTQDNPHITSITLLAHMMMENRTTLKDLKMVAMVKEDSGREVQLIHAEVGVTLMDARVVLNLMIRHAELVSCGDTFVRQARSDEDGVPVFVGAGGIKGDEDMKALLLAEEERF 1962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1572 1595 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1052 1091 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1656 1671 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1505 1528 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 831 860 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 645 665 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1702 1761 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1610 1671 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 153 293 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1706 1736 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 962 980 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1403 1431 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1380 1435 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1061 1091 - -
Vimu7g00647 1962 Pfam BAT2 N-terminus 112 234 IPR009738 -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1343 1364 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 152 293 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 743 759 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1321 1364 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1782 1853 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 957 1001 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 812 828 - -
Vimu7g00647 1962 Coils Coil 1064 1103 - -
Vimu7g00647 1962 PANTHER PROTEIN MODIFIER OF SNC1 1 501 1116 IPR038808 -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1798 1834 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 1610 1633 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 981 1001 - -
Vimu7g00647 1962 MobiDBLite consensus disorder prediction 722 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00647 Vimu-Chr7 6502112 6514830 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00647 - - vun:114177734 2388.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00647 7 6502112 6514830 Vimu7g00647 7 6502112 6514830 ECH