LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00645	ATGAAGAAGGGAATAACACTACTAACCATAACAGTGATCGCGATATGTTTGGCTATGGTTAGCAGTGCGCCGGAGTCCCCACCGTACACTGTGGCTCTATGGAACCTCCGTTTGGATGTCTGCTCCCGCTCTCGACATTTCCTTCGAGAAAGCCTCCTGGGACGGTTTTCACAGTTTACTGAAGGCGCCAACCTCAATTTCTCGCGAATCCCAATGACCGTTCCCGTCTTGACCACCACCGTCCCCGGAGCCGGTCCCCTCAAGTCCCAAGGCTACTACGTTAGTTTATACTTACCCGTTAAGTTCCAAGGAAACCCACCACTGCCGCTTCCAGAACTCAATATCAGGCCCTATGAATTCACCACCCACTGCGTTGCGGTTAGAAAGTTCTCTGGATTCGCCAATGATGAGAGGATTGTCAAGGAGGCGGAAAAGCTTGCCACCAGCCTCAGTCGCTCTCCCTGGGCGCAGTCCAAGACTCGCCGTGGTTACTCGATTGCGCAGTACAATACTCCCATCCGAATTGTGAATCGCAAAAACGAGGTCTGGGTGGACATTGATGCTCCTCAATTAGGCTGTGAATCGGTTGGAGTACGGAAGAATGGTTCGGTACTTGTGAAGGTGTTCTTGCCTGCTTCTTGTACAGCCCAGGGTCTGCCACCAGCCATTGTGGAGGCACTTTCTGTATCATATGCATTTGTCAAGTTGTCTAAAATAAGTATAGCAGTGTCTGCAAGGGCAGGGAGTGATGGTCGGTGCAAGAGGCACGGACAAGGAGCGGTTCCTGGCAGGCTTCTAATAGAAGAGACACATGGACGAATCGAACATATTCCGGAATGA	840	0.5119	MKKGITLLTITVIAICLAMVSSAPESPPYTVALWNLRLDVCSRSRHFLRESLLGRFSQFTEGANLNFSRIPMTVPVLTTTVPGAGPLKSQGYYVSLYLPVKFQGNPPLPLPELNIRPYEFTTHCVAVRKFSGFANDERIVKEAEKLATSLSRSPWAQSKTRRGYSIAQYNTPIRIVNRKNEVWVDIDAPQLGCESVGVRKNGSVLVKVFLPASCTAQGLPPAIVEALSVSYAFVKLSKISIAVSARAGSDGRCKRHGQGAVPGRLLIEETHGRIEHIPE	279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g00645	279	Pfam	SOUL heme-binding protein	53	184	IPR006917	-
	Vimu7g00645	279	PANTHER	HEME-BINDING PROTEIN-RELATED	58	185	IPR006917	-
	Vimu7g00645	279	FunFam	Heme-binding protein 2	46	192	-	-
	Vimu7g00645	279	SUPERFAMILY	Probable bacterial effector-binding domain	19	186	IPR011256	-
	Vimu7g00645	279	Gene3D	Regulatory factor, effector binding domain	27	191	IPR011256	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g00645	Vimu-Chr7	6496146	6499417	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g00645	-		-	gmx:100306073	266.159

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00645	7	6496146	6499417	Vimu7g00645	7	6496146	6499417	ECH