Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00547 ATGGAGTTTGGAAGCAACGGCTCTTACTATGATGTGCCAGAGGGAGTGGATATTCGGGGAAGATATGATGCAGAGTTTGCAAAAATCCTGACAAAAGATGCTTTGAAATTCGTTGCTGAGCTTCAACGTGAGTTCAGGAACCATATCAAGTATGCATTAGAGAAGAGAAAAGAGGCAAAGAGGAGGTACAATGAAGGGGCTCTTCCGGGGTTCGATCCTGCCACCAGGTACATAAGAGAGAAAGAATGGGTTTGTGCACCTGTTCCACCAGCTGCTGCAGATAGGAAAGTGGAAATCACCGGTCCTGTCGAAAGAAAGATGATCATCAATGCTCTCAACTCTGGTGCTAAAGTCTTCATGGCTGATTTTGAAGATGCACTGTCACCCAGCTGGGAAAATCTTATGAGAGGCCAAGTGAACTTGAAGGATGCCGTGGATGGCACCATAAGCTTCCATGACAAAGTAAGAAACAGGGTTTACAAGCTCAATGAACAGACAGCAAAGCTTTTTGTGCGACCAAGAGGTTGGCACCTACCCGAGGCACATATATTCATTGATGGTGAACCTGCAACCGGTTGCATTGTTGATTTTGGCCTCTTTTTCTATCACAATCACTCGGAATTTCGGCGCACTCAAGGTGCTGGCTTTGGCCCCTTCTTTTATCTTCCCAAAATGGAGCATTCAAGGGAAGCAAAGATATGGAACAGCGTGTTTGAGAAGGCTGAGAAGGTGGCAGGCATCGAAAGAGGAAGCATAAGGGCGACGGTTCTGATAGAAACACTTCCTGCAGTGTTTCAAATGAATGAAATTCTGTATGAGCTGAAGGACCACTCCGTGGGTCTGAACTGTGGGCGTTGGGATTACATTTTCAGTTATGTGAAGACCTTCCAAGCTCACCCAGATCGCCTCCTACCAGATAGGGTGCAGGTTGGCATGACTCAACACTTCATGAAAAGCTACTCTGATCTTCTCATCAGGACGTGTCACAGGCGCGGTGTGCATGCGATGGGAGGAATGGCGGCGCAGATTCCAATCAAAGAGGATCCGGTGGCTAATGAGTTAGCACTGGAACTTGTGAGGAAGGACAAACTTAGAGAAGTGAAGGCAGGGCACGATGGAACTTGGGCAGCACACCCAGGTCTCATTCCAGCTTGCATGGAGGTTTTCAACAACATCATGGGCAATGCTCCAAACCAGATAGAGACGAACCAACGTGAAGATGCTGCAAACATAACTGAGGAAGACCTATTGCAGACACCAAGAGGAGGCCGCACAATGGAAGGTCTGAGATTGAACACAAGGGTGGGGATTGAGTACGTGGCAGCATGGCTGAGTGGAAGCGGTTCGGTGCCTCTTTACAACCTGATGGAAGATGCTGCGACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGCTCAAGTATGGAGTGGAACTGAATGGGGATGAAGTTGGAGTGAGAGTGAACAGAGAACTTTTCGGCAGGGTGGTTGAAGAAGAGATGGCAAGGATTGAAAAGGAAGTTGGGAAAGAGAAGTTGAAGAAGGGAATGTACAAGGAGGCTTGCAAGATCTTCACTCGCCAATGCACCTCTCCAACACTTGATGATTTTCTCACTCTGGATGCCTATAATTACATAGTCCTGCATCACCCCAGAGAATCTTCAAAACTTTGA 1674 0.4761 MEFGSNGSYYDVPEGVDIRGRYDAEFAKILTKDALKFVAELQREFRNHIKYALEKRKEAKRRYNEGALPGFDPATRYIREKEWVCAPVPPAAADRKVEITGPVERKMIINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVDGTISFHDKVRNRVYKLNEQTAKLFVRPRGWHLPEAHIFIDGEPATGCIVDFGLFFYHNHSEFRRTQGAGFGPFFYLPKMEHSREAKIWNSVFEKAEKVAGIERGSIRATVLIETLPAVFQMNEILYELKDHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVQVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIKEDPVANELALELVRKDKLREVKAGHDGTWAAHPGLIPACMEVFNNIMGNAPNQIETNQREDAANITEEDLLQTPRGGRTMEGLRLNTRVGIEYVAAWLSGSGSVPLYNLMEDAATAEISRVQNWQWLKYGVELNGDEVGVRVNRELFGRVVEEEMARIEKEVGKEKLKKGMYKEACKIFTRQCTSPTLDDFLTLDAYNYIVLHHPRESSKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00547 557 CDD malate_synt_A 29 547 IPR006252 GO:0004474|GO:0006097
Vimu7g00547 557 FunFam Malate synthase 12 422 - -
Vimu7g00547 557 PIRSF Malate_synth 8 548 IPR006252 GO:0004474|GO:0006097
Vimu7g00547 557 ProSitePatterns Malate synthase signature. 275 290 IPR019830 GO:0004474|GO:0006097
Vimu7g00547 557 FunFam Malate synthase 423 547 - -
Vimu7g00547 557 SUPERFAMILY Malate synthase G 13 547 IPR011076 GO:0003824
Vimu7g00547 557 Gene3D Malate synthase, domain III 423 547 IPR044856 -
Vimu7g00547 557 Gene3D Malate synthase, domain 3 12 422 IPR046363 -
Vimu7g00547 557 PANTHER MALATE SYNTHASE 10 553 IPR006252 GO:0004474|GO:0006097
Vimu7g00547 557 Pfam Malate synthase 17 547 IPR001465 GO:0004474|GO:0006097
Vimu7g00547 557 NCBIfam malate synthase A 29 546 IPR006252 GO:0004474|GO:0006097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00547 Vimu-Chr7 5599716 5601667 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00547 K01638 - gmx:732628 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00547 7 5599716 5601667 Vimu7g00547 7 5599716 5601667 ECH