Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00543 ATGTCGAACACTAACTTGGAAGATGTTCCCTCTCTGGATCTCATGACTGAGCTCCTTCGTCGCTTCAAATGCTCCTCCAAACCTGACAAGCGCCTTATTCTCATTGATCCAAAAGCGCTTTTGTTAAATAGCTCGATTCTTTCGCTCTTCTTGCGTTTCGATGTTGTCGATGCGGTTTTTAGGGTTTCCTTCCTGAGGCCTTATCATCGTTTAATAGGGAAAATACTGAGAAATTTGAGTGGTTTTAGCTATGCGGTTCAGGATGGGGATACTCTTATGCCTCAATGCCCACCTGGATCTGGTAAAGGTACCCAGTCGCCAATCATAAAGGATGAGTACTGCTTATGCCACTTAGCTACTGGTGATATGTTAAGAGCAGCTGTAGCTGCCAAGACCCCTCTTGGTGTCAAGGCTAAAGAAGCTATGGATAAGGCATGGGATCTTATTTGGAATTTACTTTTTTTACCATATGAAGCAATGAAAAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTCCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGGGTAAACAGGGAGTGAAAGTTGATAAGGTGCTCAATTTTGCAATTGACGATGCAGTCCTTGAGGAGCGAATTACTGGTCGCTGGATACACCCATCCAGTGGCAGAACATACCACACAAAATTTGCCCCTCCTAAGGTTGCTGGGGTTGATGATGTTACTGGTGAACCACTTATCCAGCGTAAGGATGACACTGCAGCTGTTCTGAAGTCGAGACTGGAGGCATTTCACAGGCAAACTGAGCCCGTTATCGATTACTATTCGAAGAAGGGCATAGTTGCTAATCTTCATGCTGAGAAACCTCCCAAAGAGGTGACAGTTGAAGTAGAGAAAGTGCTGTCTTAA 906 0.4437 MSNTNLEDVPSLDLMTELLRRFKCSSKPDKRLILIDPKALLLNSSILSLFLRFDVVDAVFRVSFLRPYHRLIGKILRNLSGFSYAVQDGDTLMPQCPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKAWDLIWNLLFLPYEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLGKQGVKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVAGVDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGIVANLHAEKPPKEVTVEVEKVLS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00543 301 Pfam Adenylate kinase, active site lid 215 250 IPR007862 GO:0004017
Vimu7g00543 301 PRINTS Adenylate kinase signature 169 185 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 PRINTS Adenylate kinase signature 93 106 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 PRINTS Adenylate kinase signature 248 263 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 PRINTS Adenylate kinase signature 121 135 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 PRINTS Adenylate kinase signature 265 279 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 PANTHER NUCLEOTIDE KINASE 8 296 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 Gene3D - 96 301 IPR027417 -
Vimu7g00543 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 297 IPR027417 -
Vimu7g00543 301 Hamap Adenylate kinase [adk]. 97 301 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 ProSitePatterns Adenylate kinase signature. 169 180 IPR033690 -
Vimu7g00543 301 NCBIfam adenylate kinase 97 300 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vimu7g00543 301 CDD ADK 97 292 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu7g00543 301 FunFam Adenylate kinase mitochondrial 92 301 - -
Vimu7g00543 301 Pfam Adenylate kinase 97 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00543 Vimu-Chr7 5565529 5568864 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00543 K00939 - gmx:100791848 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00543 7 5565529 5568864 Vimu7g00543 7 5565529 5568864 ECH