Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00528 ATGGCAACAATGGGAGAGAGTCCTCGGAGCCCAGAAGCGAAATTGGGTATGCGAGTTGAGGATCTTTGGGACGTTCAAGAGGCACAGCTAAGTCCTACCGAGAAACTCAACGCTTGTTTTGAAAGCATCCCTGTCTCTGCGTTTCCTTTGGCTCCTTCAAACCAAGAAATTGAGATCAAATCAGACGCCACCTTGGCCGAGGCTGTTATGAAACTGGCACGACACAATGTTTTCAGTGCACCTGTGGTGGATGTTGATGCTCCTGAAGATGCTAGTTGGATTGACAGATACATCGGAATTGTCGAGTTTGCTGGAATTGTTGTATGGATCTTGCATCAGTCTGAACCTGCATCACCTAGGAGTCCATCTACTCCAACCAGTGCAAAGGCTATTGCAGCTGCAGCTAATGGACTGAGTTTTGCTCTGGAACTTGAAGCCTTAGGCCTTGGATCTGCTGCAACAACTGCAGGGAACTTTTTTGTAGATCTTACTTCATCTGAACTTTATAAGAACACCACGGTTCGTGACATTGCAGGGACATTCCGCTGGGCCCCATTTCTTGCTTTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGTTGCTTTCGAAGTACAAGATGAAGAGTGTCCCTGTGTTGGATTTGGGCTCTGGTACAATAGATAAGATTATTACACAATCTGCCGTGATTCATATGCTGGCAGAATGCGCTGGACTTCAGTGGTTTGAAAGTTGGGGAACCAAGAAAATATCTGAAGTTGGTCTTCCCCTGGTTACACCAGATCAGATCATAAAGGTTTATGAGGATGAACCAGTCCTTCAAGCATTTAAAGTAATGAGAAAAAAGAGGGTTGGAGCAGTGCCTGTAATTGAGAGAGATAGCGGAAAGGCAGTTGGTAATATAAGCTTGCGAGATGTTCAATTCTTGTTAAATGCTCCGGAAATATACCATGATTATAGAGCGATTACTGTAAAGGACTTCCTGACAGCGGTTAGAAGTTACTTGGAGAAGAACAAAAACGCATTTCCAATGGTAAGTGAATATGTTACATGCAGAGAGGACTGTACAGTGAAAGAGTTGATTCAACTGCTGGATCAAGAGAAGATTCATAGGGTGTATGTGGTGGACAATGATGGGAATCTGCAAGGACTAATCACACTAAGAGACATAATATCAAGACTAGTACATGAACCCCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTTCCTCTGCCTGCAAATACCAGAGTTTAA 1257 0.436 MATMGESPRSPEAKLGMRVEDLWDVQEAQLSPTEKLNACFESIPVSAFPLAPSNQEIEIKSDATLAEAVMKLARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPASPRSPSTPTSAKAIAAAANGLSFALELEALGLGSAATTAGNFFVDLTSSELYKNTTVRDIAGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGSGTIDKIITQSAVIHMLAECAGLQWFESWGTKKISEVGLPLVTPDQIIKVYEDEPVLQAFKVMRKKRVGAVPVIERDSGKAVGNISLRDVQFLLNAPEIYHDYRAITVKDFLTAVRSYLEKNKNAFPMVSEYVTCREDCTVKELIQLLDQEKIHRVYVVDNDGNLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANTRV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00528 418 CDD CBS_pair_SF 199 306 - -
Vimu7g00528 418 CDD CBS_pair_SF 261 391 - -
Vimu7g00528 418 ProSiteProfiles CBS domain profile. 344 402 IPR000644 -
Vimu7g00528 418 SUPERFAMILY CBS-domain pair 247 404 IPR046342 -
Vimu7g00528 418 Gene3D - 247 397 IPR046342 -
Vimu7g00528 418 ProSiteProfiles CBS domain profile. 258 319 IPR000644 -
Vimu7g00528 418 SMART cbs_1 347 395 IPR000644 -
Vimu7g00528 418 SMART cbs_1 262 311 IPR000644 -
Vimu7g00528 418 SMART cbs_1 55 111 IPR000644 -
Vimu7g00528 418 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 46 394 - -
Vimu7g00528 418 Gene3D - 33 238 IPR046342 -
Vimu7g00528 418 SUPERFAMILY CBS-domain pair 28 234 IPR046342 -
Vimu7g00528 418 ProSiteProfiles CBS domain profile. 52 118 IPR000644 -
Vimu7g00528 418 Pfam CBS domain 344 395 IPR000644 -
Vimu7g00528 418 Pfam CBS domain 262 306 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00528 Vimu-Chr7 5452874 5455659 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00528 - - gmx:100812388 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00528 7 5452874 5455659 Vimu7g00528 7 5452874 5455659 ECH