LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00518	ATGGAGGTTGAACTCAAACAGTTGAACGCCGATCTTCAATTTCTGAGCCAATCGCTTCCCGATCCATCTCACCATGCTTTGCTCTGCAAGATTCAATTGCGTGTTGAGGAACTTGGCAAGCTTGCAGCGGCTGCACCTGTTCGACGCTCCAAAGTTGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGGCTTATGGCACTTCAGAGAATGGGTATTGTGGAGAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGGATAGGTGGTGTAGGAAGTGTTGCAGCTGAGATGCTGACTAGGTGCGGCATAGGTCGACTTTTGTTGTATGATTATGACAAGGTGGAGCTTGCGAACATGAATAGATTGTTCTTTCGTCCAGATCAGGTTGGTTTGACTAAGACTGATGCAGCTGTACAGACTCTTTCAGACATAAACCCTGATGTTGTACTAGAGAGCTATACACTGAATATCACAACCGTCACAGGTTTTGAAACCTTTATGTCAAGTTTGACAAAAAAATCATTTTGCCCAAATAAAGAAGGAAGTGGCGTGGATCTGGTTTTAAGTTGTGTGGATAATTACGAAGCAAGAATGGCTGTTAACCAGGCCTGTAATGAATTGAGTCAAACATGGATGGAGTCAGGTGTTTCCGAGGATGCTGTTTCTGGCCATATTCAGTTACTTATTCCTGGTGAAACTGCCTGTTTTGCTTGTGCACCTCCTCTGGTTGTTGCATCTGGGGTAGATGAACGCACACTCAAGCGTGAAGGGGTCTGTGCTGCCTCTTTACCCACCACTATGGGGGTTGTTGCTGGCCTTCTAGTCCAAAACACACTAAAATTATTATTAGGCTTTGGACAAGTCTCTCCATATTTGGTAAGGGATGGTGATGTTTTCTTTATTCTTCTTCCTGAGTTGTTACAAATGGGATATAATTCTCTAAAGGATTTTTTTCCAACTATGCAAATGAAGCCAAATCCTCAATGTTCAAATGTTGCTTGCTTGAAAAGACAGGAAGAATACATGCTTGCAAAACCAGCAAGAGATGCTGCAGCCAAAGCAAAAATGGAAGCTGAAGTACTATCAACTGAGGAAGTGCCACTTCACGACGATAATGAATGGAATATAAGTGTTGTTGATGATGTTGAGCTGGATGGTCCAGATACCAGAAGTTCAGATGTTCTGCCGGAAGGTCTCACACATGAACTTCCTAGTGCAGACGAGTTTCATGAGGCAACTCCTGACGCTCCAGTAGCTGACAATGACGACCTTGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTGCATAG	1332	0.4347	MEVELKQLNADLQFLSQSLPDPSHHALLCKIQLRVEELGKLAAAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGLTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLTKKSFCPNKEGSGVDLVLSCVDNYEARMAVNQACNELSQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLVRDGDVFFILLPELLQMGYNSLKDFFPTMQMKPNPQCSNVACLKRQEEYMLAKPARDAAAKAKMEAEVLSTEEVPLHDDNEWNISVVDDVELDGPDTRSSDVLPEGLTHELPSADEFHEATPDAPVADNDDLEDLRRQLEAINSA	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g00518	443	Pfam	ThiF family	65	294	IPR000594	-
	Vimu7g00518	443	FunFam	Putative ubiquitin-like modifier-activating enzyme 5	82	361	-	-
	Vimu7g00518	443	CDD	ThiF_MoeB_HesA_family	64	329	-	-
	Vimu7g00518	443	ProSitePatterns	D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.	88	116	IPR029752	-
	Vimu7g00518	443	Gene3D	-	82	361	-	-
	Vimu7g00518	443	SUPERFAMILY	Activating enzymes of the ubiquitin-like proteins	60	341	IPR035985	GO:0008641
	Vimu7g00518	443	PANTHER	UBIQUITIN-ACTIVATING ENZYME E1	47	436	IPR045886	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g00518	Vimu-Chr7	5394969	5400488	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g00518	52	247	EF-hand Containing Proteins	AT2G30110	26.442	8.33e-06	46.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g00518	K12164		-	gmx:100819760	751.51

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00518	7	5394969	5400488	Vimu7g00518	7	5394969	5400488	ECH