Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00516 ATGAACTATCGCGAGGCTACTTTGGTTGCCACGGCAACTGTGATTGGCGCCATGGCCTCTGCAGTTGCCCTCCGCTTCTTCTGCCGCTCTCAAACGCGCGTCAAATCGTCCCAAAACGGCACCGTTTCCTTTCCCCAGGACCCTTTCGACCCTTCCAAGAGAAAAGGATATTTATCGTGGGATGACTATTTTATGGCAATTGCATTTTTGTCAGCTGAGAGGTCCAAAGACCCTAACAGGCAGGTTGGTGCTTGTTTGGTGAGTCAAGATGGTATAATTCTTGGAATTGGTTATAATGGGTTTCCAAGGGGTTGTTCTGATGACAAGCTACCCTGGGCAAAGAAATCTCCGTGTTTCAGAAATCCAGGACTGGGAATCCTTTGGAGACAAAGTACCCGTAAGTGTGTTTTGATGAGATGGATTCTGTTATGCACCGAATCTTCTGTGTGGCTTGATAATGTTCTTGCTCAAGTCATTTATTTATTTATTATTATTATTATTATTAAACAAGTAAATGCTATTCTTAACACAAATCATGCCTCTGCTGCTGGACAACGGCTATATGTGACCATGTTTCCCTGCAATGAATGTGCTAAGATCATAATCCAGGTTGGTAATCTTGTCCTGCTTGACGTATAA 639 0.4351 MNYREATLVATATVIGAMASAVALRFFCRSQTRVKSSQNGTVSFPQDPFDPSKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSPCFRNPGLGILWRQSTRKCVLMRWILLCTESSVWLDNVLAQVIYLFIIIIIIKQVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQVGNLVLLDV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00516 212 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 59 212 IPR002125 -
Vimu7g00516 212 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 171 205 IPR015517 -
Vimu7g00516 212 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 59 205 IPR002125 -
Vimu7g00516 212 SUPERFAMILY Cytidine deaminase-like 59 205 IPR016193 GO:0003824
Vimu7g00516 212 Gene3D Cytidine Deaminase, domain 2 51 206 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00516 K01493 - gmx:100792003 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00516 7 5385335 5386753 Vimu7g00516 7 5385335 5386753 ECH