Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00485 ATGCACTCATCTCGTGCTGAACCAGCAGCCTCACAACCCTGCTTTAATGGCTGCTTTCCTTCTCCATTTCTTGCCTCTGAGAGGACCCATAAGCCTAAAGTCAATAATGTAACTTCATCACACGATGACTTCGCTGCAGCCACATCTTCTAGCCTTCACCCTCACACACAATTCACCAACCCTGACTCCCTTCCATCTCTGCAAGACTCATACATCAGCTTCACCAAAGCATTCCCTCAATTTTCTGCTACTTCTCAGCTTGATCAAATTCGAGCCCAAGAATACCATCACTTGAACCACTCCAACGCCTGCTTCGATTACACTGGATATGGCCTTTTCTCCTACGCTCAGCAACAGAGACCTTGCCCCAATGCTTCAGTTGTTTCTTCTTCTTCATCCTCATCATTCTCGCACTTTACACCAGACGCCTCCTTCTTTGATATATCCTACAGGTCGGTGAACTTGCAATCCCAGGTTCTCTACGGTGGGCACGAGTCAGAACTGGAAGCCAGAATCAGAAAGAGAATCATGTCTTTCATGAATCTCTCTGAAGCTGAGTACACCCTGGTTTTCATTGCCAATGAGGTATCTGCTTTTAAAATTGTTGCCGATTCTTTCCAATTTCAATCCAATAGACGCCTCCTCACAGTGTATGACCACAGCAGCGAGGCATTGGATGTGATGATTGAGAGTTGCAAGAAGCAAGGGGTGCGTGTCTTGTCATCGGAATTCTCCTGGTCCAATCTCGGAATCCAGAGGAGGAAGCTAAAGAAGATGATCATGAATAAAAGGGATAAGAGAAAGGGTGGTTTATTTGTTTTCCCACTTCATTCAAGGGTAACCGGAGCACCATATTCCTACGGTTGGATGTCCACGGCTCAGGAAAATGGGTGGTGCGTCTTGCTTGATGTGTGTGCATTGAAACCTAAGGAAATGGACACCTTGGGTATGTTACTTTTTAAGCCTGATTTTATGGTTTGCTCCTTTTACAAAGTTTTTGGTGAAAACCCCTCAGGTGTTGGGTGCTTATTTGTTAAAAAATCTAGTGTGTCTGCTTTGAAAGATCCTTGCAATGCCACAAACATAGGAATCATAAGCCTTGTCCCAGCATTTAAACCTGAGACTGAACAAGTAGTGATTGAAACTGAAACGGTTCATCTGCAAGAAGGGCCATCATCAACCTCAGAAATTGAGGAGTTAAGCACACCCTTTGACTCGTCGTCCAGGGATAGAAACAGATTAGGTACTAAAAACGAAAGCTCAGAGATTGAATGTAGAGGATTAGACCATGCAGACTCTGTGGGTTTATTACTGATCAGTAACAGGACCAAGTATCTGGTCAATTGGCTGGTTAATGCTCTAATGAGTCTTAAACATCCGCATCATGAAAATAAGCTTTCCCTAATTAGGGTCTATGGGCCTAAGATAAGTTCTTTCCGTGGACCTGCTGTGGCATTTAATATATTTGACTGGAAAGGGGAAAAAATTGATCCTGCACTTGTGCAGAAGCTAGCTGATAGGAACAACATATGTTTAAATAGCTCAATTTTGAGAAATATAAGGTTCTATGACAAAAATGAAGAGGAGAGAGTTTGTGAGGTTGAAGGGTTGGGGCTATCGAAGAAGACACGTAGCCATGAATCTGGGATATATGTTGTGACTGCTACACTGGGTCTCTTGACAAATTTTGAAGATATTTACAGATTATGGGCTTTTCTTTCTAGGTTCCTGGATGCAGACTTTGTCGAGAAAGAGAAATGGAGATACATAGCTCTAAATCAAAAGACTGTTGAAGTATGA 1800 0.4294 MHSSRAEPAASQPCFNGCFPSPFLASERTHKPKVNNVTSSHDDFAAATSSSLHPHTQFTNPDSLPSLQDSYISFTKAFPQFSATSQLDQIRAQEYHHLNHSNACFDYTGYGLFSYAQQQRPCPNASVVSSSSSSSFSHFTPDASFFDISYRSVNLQSQVLYGGHESELEARIRKRIMSFMNLSEAEYTLVFIANEVSAFKIVADSFQFQSNRRLLTVYDHSSEALDVMIESCKKQGVRVLSSEFSWSNLGIQRRKLKKMIMNKRDKRKGGLFVFPLHSRVTGAPYSYGWMSTAQENGWCVLLDVCALKPKEMDTLGMLLFKPDFMVCSFYKVFGENPSGVGCLFVKKSSVSALKDPCNATNIGIISLVPAFKPETEQVVIETETVHLQEGPSSTSEIEELSTPFDSSSRDRNRLGTKNESSEIECRGLDHADSVGLLLISNRTKYLVNWLVNALMSLKHPHHENKLSLIRVYGPKISSFRGPAVAFNIFDWKGEKIDPALVQKLADRNNICLNSSILRNIRFYDKNEEERVCEVEGLGLSKKTRSHESGIYVVTATLGLLTNFEDIYRLWAFLSRFLDADFVEKEKWRYIALNQKTVEV 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00485 599 MobiDBLite consensus disorder prediction 403 418 - -
Vimu7g00485 599 Gene3D Aspartate Aminotransferase, domain 1 426 575 IPR015422 GO:0003824
Vimu7g00485 599 MobiDBLite consensus disorder prediction 389 418 - -
Vimu7g00485 599 SUPERFAMILY PLP-dependent transferases 159 576 IPR015424 -
Vimu7g00485 599 Gene3D - 152 381 IPR015421 GO:0003824
Vimu7g00485 599 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 68 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00485 Vimu-Chr7 5129556 5131355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00485 - - vra:106767087 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00485 7 5129556 5131355 Vimu7g00485 7 5129556 5131355 ECH