Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00432 ATGGAAAGGAGCAAGCCTCCTGTGAGAGGGAAATCCTCGTTGACGATGCAAATCCATGGTTGTAGGCATGACAATGATCGTAGTTGCAATAGTTGCAATGATGATGGTGTTAAGAGGGTAGTTCCATTTCTCTCGTTCTCACTTCCACCTAGTTTTCCTCTTTCACTCAAACAACAAACAACAAAGATGGGTTTGGAAGTAGAAGAACCAATAACAACAACAGAACAATCCACAGCACCAGAAACGAGGTCGTTGAGTTCACCGCAAAAAGTTCAAAACAACTTGACCGTTACATCCACGCTCCCAATCGTGCAGCCTCACGCGCTTCTCCCACAGCCTGTGCCCCCAACCGCATCACTCCGAAACGATGTCACCGTTTCCTCTGCATTTGGCAAGTTCTTTCACCAGCGCCGCCATGAGCTGTCCTCTGCAATCTCGCGAGGGATCTCCACTCTTAAGCACCAAACCGATGATGCTTTGAAGAAGAACAAGAACGAAGGCGTGACAGAGTTCAACCTCTCTGGACTGAAAATCTTTGTCGCGGTGAAAAAGAACGCACCGTTCTCACAGCGCCGCATCAGCTTCTTCTCGCGCTCAAACTGCAGAGAGTGCAGTGCAGTGCGGAGCTTCTTCAGAGAGAGAGCGCTGAGTTTCGTGGAGATAAATGTGGACGTGTTCACAGAACGGGATAAGGAATTGAGGGAGAGAACGGGGAGCACGACGGTGCCGAAGATTTTCTTTGGTGAAAAGCTGATAGGAGGGCTGGTGGAGCTCAACGCACTGCGGAAGGACGGCAACAAGGAGTTTGAGAGGCAATTGAAAGACGCAGAAGGAGAGGGGCCCGCGGCTCCGGTGTACGGGTTCGATGAAGCGGCGGAGGAAACAGTGAAGGAAGAAGCGGACGAAGAGACTTTGAAGGTAGTTAAGGTTTTGAGGCAGAGGTTGCCAATTCAGGACAGAGTGTTGAAAATGAAGATTGCGAGGAATTGCTTTGCAGGGAGCGAGTTGGTGGAGTTTCTGGTTCGCAACCATGGCTACGCTCCTGCCAAGGCTGTTGAGATTGGAAAACAGTTATGCAAGAAGCACTTCATCCATCATGTTTTCGGGGAAAATGATTTCGAGGAGGGAAACCACTTCTATAGATTCATTGAGCACGAACCCTTAATCTCCAAATGCTTTAACTTCCGTGGTGCCACGTATGATAGTGAACCGAAGGCTGCAGCTGCAGTGTGTGATAGGCTCACCAAGATTATGTGTGCTATTCTTGAGTCTTATGCTTCTGAAGACAGGCAACGTGTTGATTATCTGGCCATTAGCAAAAGTGAAGAATTTCGTAGGTATGTAAACATGACCCAAGATCTGCAGCGGGTGAATCTATTGGAACTATCAGAAAACGAGACACTTGCCTTCTTCTTAAATTTGTACAATGCTATGATCATCCATGCTGTCATTAGAGTCGGGTGTCCTGAAGGTGTGATTAATAGGAGATCCTTCTCTGAGTTCCATTACTTGATAGGAGGGCATCCTTATTCTCTTAGTGCTATTAAAAATGGAATCCTCAGAAGCAATCGGAGGTCACCATACTCCTTAATCAAGCCCTTTGGCTCAGGAGACAGGCGCTTAGAGCTTGCTCTTGTAAAAATGAATCCGTTAGTTCACTTTGGCCTTTGTAATGGCACGAAGTCGAGCCCAAAGGTGAGGTTTTTCTCACCCTATAGAGTAGCAGAAGAGTTGAGATGTGCAGCCAGAGAGTTTTTTGAGAATGATGGAATTGAAGTGGACTTGGAGAAGAGAACGATTCATCTCACTCCAATTTTCAAGTGGTACTCTGGGGATTTCGGACAAGAGAAGAACATGTTAAAGTGGATAATAAATTACTTGGATGCAAATAAAGCTGGTCTTTTGACACATCTCTTAGATGAGATATTACTTATAGATCGTACAATTTGTAAACCAAAATCTGGTGCAAAAATGGTCATATTTGTATCTGTGAAAGAAGGAGCATCTAGATGA 2013 0.4595 MERSKPPVRGKSSLTMQIHGCRHDNDRSCNSCNDDGVKRVVPFLSFSLPPSFPLSLKQQTTKMGLEVEEPITTTEQSTAPETRSLSSPQKVQNNLTVTSTLPIVQPHALLPQPVPPTASLRNDVTVSSAFGKFFHQRRHELSSAISRGISTLKHQTDDALKKNKNEGVTEFNLSGLKIFVAVKKNAPFSQRRISFFSRSNCRECSAVRSFFRERALSFVEINVDVFTERDKELRERTGSTTVPKIFFGEKLIGGLVELNALRKDGNKEFERQLKDAEGEGPAAPVYGFDEAAEETVKEEADEETLKVVKVLRQRLPIQDRVLKMKIARNCFAGSELVEFLVRNHGYAPAKAVEIGKQLCKKHFIHHVFGENDFEEGNHFYRFIEHEPLISKCFNFRGATYDSEPKAAAAVCDRLTKIMCAILESYASEDRQRVDYLAISKSEEFRRYVNMTQDLQRVNLLELSENETLAFFLNLYNAMIIHAVIRVGCPEGVINRRSFSEFHYLIGGHPYSLSAIKNGILRSNRRSPYSLIKPFGSGDRRLELALVKMNPLVHFGLCNGTKSSPKVRFFSPYRVAEELRCAAREFFENDGIEVDLEKRTIHLTPIFKWYSGDFGQEKNMLKWIINYLDANKAGLLTHLLDEILLIDRTICKPKSGAKMVIFVSVKEGASR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00432 670 PRINTS Glutaredoxin signature 193 211 IPR014025 -
Vimu7g00432 670 PRINTS Glutaredoxin signature 235 248 IPR014025 -
Vimu7g00432 670 PRINTS Glutaredoxin signature 249 262 IPR014025 -
Vimu7g00432 670 ProSiteProfiles Glutaredoxin domain profile. 181 280 - -
Vimu7g00432 670 Gene3D Glutaredoxin 186 276 - -
Vimu7g00432 670 Pfam Glutaredoxin 195 252 IPR002109 -
Vimu7g00432 670 SUPERFAMILY "Winged helix" DNA-binding domain 304 397 IPR036390 -
Vimu7g00432 670 CDD DEP 303 381 - -
Vimu7g00432 670 SMART DEP_3 311 384 IPR000591 GO:0035556
Vimu7g00432 670 SUPERFAMILY Thioredoxin-like 187 265 IPR036249 -
Vimu7g00432 670 ProSiteProfiles DEP domain profile. 311 384 IPR000591 GO:0035556
Vimu7g00432 670 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 82 640 - -
Vimu7g00432 670 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 315 382 IPR000591 GO:0035556
Vimu7g00432 670 Gene3D - 298 431 IPR036388 -
Vimu7g00432 670 Pfam Protein of unknown function, DUF547 461 585 IPR006869 -
Vimu7g00432 670 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00432 Vimu-Chr7 4675011 4682055 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00432 - - pvu:PHAVU_003G007200g 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00432 7 4675011 4682055 Vimu7g00432 7 4675011 4682055 ECH