Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00383 ATGCCAGAGACTTTCACTGTGAAGGTTGAAGAGGGAAGGCCTGCAACTGATGGAAAACCATCTGCAGGTCCTGTCTATAGGAGCATTTATGCCAAAGATGCTCTCTTGGAAGTTCCTTCTCATTTGGAATCACCTTGGGATTTCTTCAGGGACTCTGTTAAGAGGAACCCCAACAGCAAAATGCTTGGTAGGCGTCAAAAAACAGAATCTAAGGCGGGTTCCTATGTATGGGTTACATATCAAGAGGTTTATGATGCTGCCTTGAAACTGGGTTTTGCCATGAGGAGCCGTGGTGTTAATCCAGGAGATCGTTGTGGCATATATGGATCCAACTGCCCTGAATGGATCATTGCAATGGAGGCTTGCAATAGCTGTGCAGTGTCATATGTTCCCTTATATGACACCCTTGTTACTCATAGATTAAGGGTCTTACCTCCATTCCATGCTGACCGAGTTCTAATTATTGATGTAGCAATTGTGAGCTTTGGAAGTGTTTCGACCACACAAAAGAAGGAAGCTGAGGAGCATGGTGTGTCCTGCTTCTCGTGGGAAGAGTTTCTCCAGATGGGATGTCTGGATTGGGATTTACCATTGAAAAAGAAGACAGACATTTGCACAATAATGTATACAAGTGGAACAACTGGAGATCCCAAAGGCGTTGTTATTAAGAATGAGGCTTTCATGGCTGAAGTGTTGTCTGTTGACCACATACTTATGTTAACAGACAGAGTGGCAGCAGAAGACGATGTGTACTTCTCCTTTCTTCCTCTTGCTCACGTATATGACCAAATAATGGAGACCTATTGCATCTCCAAGGGCTCATCAATAGGATTTTGGCAAGGAGATGTCAGGTTTTTGCTAGAAGATGTCCAGACGCTTCAACCAACTATATTTTGTGGTGTTCCTAGAGTTTATGATCGTATTTGTGCTGGTAAAACAAGAATGCTTCTTATGATCATCTTTGGTTCTGTATCAAAAGCAGACTTGCCGCAGCAGGAGTACTGCGGAGTACATTGTTTCACTAATGACAGCAAGTTAAAATATCTGGAGAAGGGTCTTCCACAACACAAAGCAGCACCTCTGTTTGATAGGCTTGTGTTTGACAAGACAAAACAAGCACTGGGTGGACGTGTTCGCATCCTGTTATCAGGAGCTGCTCCTTTGCCTAGGCATGTGGAAGAGTTTATGAGGGTTACCAGTGGATCTACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCTGGGTGTTTTACTGCCATAGGTGATGTGTATTCTATGACAGGAACAGTTGGAGTTCCCATGACAACCATTGAAGCCCGGCTTCAATCTGTGCCAGAGATGGAATATGATGCACTTTCCAATGTAGCCCGAGGAGAAATTTGTCTGAGAGGAAATACCTTGTTCTCTGGTTATCACAAGCGTGAAGATCTGACCAAAGAGGTTATGGTTGATGGTTGGTTTCACACAGGAGACATTGGAGAGTGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAGAAGAATATCTTCAAATTATCTCAAGGAGAATATATTGCTGTGGAGAATATTGAAAACAAGTATTTGCAATGCCCCCTTATAGCATCGATTTGGGTGTATGGAAACAGCTTTGAGTCATTCTTGGTGGCTGTTGTGGTCCCTGAAAGAAAGGCCATTGAGGATTGGGCAGTAATGCACAATGTGAGTGATGATTTTAAATCATTATGTGACAATCTAAAAGCAAGAAAGTACATTTTGGATGAGCTAAACAGCACTGGTCAGAAACTCCAACTCAGAGGATTTGAGCTGCTAAAATCCATTCACCTGGACCCAAATCCCTTTGACGTGGAGAGAGATTTAATAACTCCAACTTTCAAATTGAAGAGACCACAATTGCTCAAGTACTATAAGGATCACATTGATCAACTATACAGAGAAGCAAAGGGAGTAATGGAGTGA 1962 0.4251 MPETFTVKVEEGRPATDGKPSAGPVYRSIYAKDALLEVPSHLESPWDFFRDSVKRNPNSKMLGRRQKTESKAGSYVWVTYQEVYDAALKLGFAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSCAVSYVPLYDTLVTHRLRVLPPFHADRVLIIDVAIVSFGSVSTTQKKEAEEHGVSCFSWEEFLQMGCLDWDLPLKKKTDICTIMYTSGTTGDPKGVVIKNEAFMAEVLSVDHILMLTDRVAAEDDVYFSFLPLAHVYDQIMETYCISKGSSIGFWQGDVRFLLEDVQTLQPTIFCGVPRVYDRICAGKTRMLLMIIFGSVSKADLPQQEYCGVHCFTNDSKLKYLEKGLPQHKAAPLFDRLVFDKTKQALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTIEARLQSVPEMEYDALSNVARGEICLRGNTLFSGYHKREDLTKEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERKAIEDWAVMHNVSDDFKSLCDNLKARKYILDELNSTGQKLQLRGFELLKSIHLDPNPFDVERDLITPTFKLKRPQLLKYYKDHIDQLYREAKGVME 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00383 653 Pfam AMP-binding enzyme 50 515 IPR000873 -
Vimu7g00383 653 CDD LC-FACS_euk 73 646 IPR045311 GO:0004467|GO:0006631
Vimu7g00383 653 MobiDBLite consensus disorder prediction 1 20 - -
Vimu7g00383 653 Pfam AMP-binding enzyme C-terminal domain 525 576 IPR025110 -
Vimu7g00383 653 Gene3D - 36 507 IPR042099 -
Vimu7g00383 653 ProSitePatterns Putative AMP-binding domain signature. 207 218 IPR020845 -
Vimu7g00383 653 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 645 - -
Vimu7g00383 653 SUPERFAMILY Acetyl-CoA synthetase-like 37 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00383 Vimu-Chr7 4296821 4303128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00383 5 646 Acyl Lipid Metabolism Gene Families AT4G23850 52.632 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00383 K01897 - gmx:100779735 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00383 7 4296821 4303128 Vimu7g00383 7 4296821 4303128 ECH