Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00357 ATGAGCGCAGTCTCTTCCAGTTCCCTTTGTTTTTACACTGGCCATTCATGGAACAGTCCCAAGGAGTTTGGAAGGGGCAGAAAGCAACAAGATAGGAAGCTACTTGTGAAGTGTTCCAGCAAGAGTGGGAGTCCATCTTCACAAAATGCGGCTCGCGTTGGTGTTCTTGGAGCTAGTGGCTACACTGGTTCTGAGGTTTTGCGACTCTTGGCAAATCATCCACAATTTGGGATTGCACTGATGACTGCCGATAGGAAAGCTGGGCAGCCAATCTCTTCTGTATTCCCACATCTGAGCACTCGGGACTTGCCAGATTTGATTGCAGTAAAGGATGCGGACTTTTCTGACGTGGATGCTGTATTCTGTTGTTTACCTCATGGGACTACTCAGGAAATAATTAAAGGCCTGCCCAGTCACTTGAAGATTGTTGATCTTTCAGCAGATTTTCGACTAAAAGATCTTTCTGAATATGAAGAGTGGTATGGTCAGCCACACAGAGCACCAGATTTACAGAAAGAAGCTGTATATGGATTGACAGAGGTTTTAAGGGAGGAAATAAAGAATGCACGTCTAGTTGCCAATCCTGGTTGTTATCCAACTTCTGTTCAACTTCCCGTTGTCCCACTGATAAAGGCTGGTCTAGTTGAGATTAAAAATATTATCATTGATGCTAAATCTGGTGTCAGTGGAGCAGGGCGTAGTGCCAAAGAAAATTTATTGTTCACTGAAGTAACTGAAGGTCTTAATTCTTATGGTGTTACCCGTCATCGCCATGTTCCTGAAATAGAACAAGGACTTGCTGATGCTGCAGGTTCAAAAGTAACCGTTAGTTTTACACCACACCTAATTCCAATGAGTCGTGGAATGCAATCAACTATTTATGTGGAAATGGCTCAAGGAGTGAGAACTGAGGACCTGCACCGACAGCTGAAGCTCTCATATGAGGAAGAAGAATTTGTTGTGGTGCTGGAAAATGGAGCCATTCCTCGAACTCACAGTGTGAAGGGGACTAATTACTGTTTAATCAATGTCTTTCCGGATCGAATTCCTGGAAGAGCAATAATTATATCTGTTATTGATAATTTAGTGAAGGGAGCTTCAGGTCAAGCTTTACAAAACCTTAACTTGATAATGGGATTTCCAGAAAATCTGGGACTTCATTACCTGCCTCTGTTTCCTTAG 1182 0.4298 MSAVSSSSLCFYTGHSWNSPKEFGRGRKQQDRKLLVKCSSKSGSPSSQNAARVGVLGASGYTGSEVLRLLANHPQFGIALMTADRKAGQPISSVFPHLSTRDLPDLIAVKDADFSDVDAVFCCLPHGTTQEIIKGLPSHLKIVDLSADFRLKDLSEYEEWYGQPHRAPDLQKEAVYGLTEVLREEIKNARLVANPGCYPTSVQLPVVPLIKAGLVEIKNIIIDAKSGVSGAGRSAKENLLFTEVTEGLNSYGVTRHRHVPEIEQGLADAAGSKVTVSFTPHLIPMSRGMQSTIYVEMAQGVRTEDLHRQLKLSYEEEEFVVVLENGAIPRTHSVKGTNYCLINVFPDRIPGRAIIISVIDNLVKGASGQALQNLNLIMGFPENLGLHYLPLFP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00357 393 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 197 361 - -
Vimu7g00357 393 FunFam N-acetyl-gamma-glutamyl-phosphate reductase 195 361 - -
Vimu7g00357 393 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 51 387 IPR000706 GO:0003942|GO:0006526|GO:0070401
Vimu7g00357 393 Pfam Semialdehyde dehydrogenase, dimerisation domain 208 364 IPR012280 GO:0008652|GO:0016620|GO:0046983
Vimu7g00357 393 Gene3D - 52 379 - -
Vimu7g00357 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 51 222 IPR036291 -
Vimu7g00357 393 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 192 208 IPR023013 GO:0003942
Vimu7g00357 393 SMART Semialdhyde_dh_3 52 189 IPR000534 GO:0016620|GO:0051287
Vimu7g00357 393 Pfam Semialdehyde dehydrogenase, NAD binding domain 52 189 IPR000534 GO:0016620|GO:0051287
Vimu7g00357 393 NCBIfam N-acetyl-gamma-glutamyl-phosphate reductase 52 393 IPR000706 GO:0003942|GO:0006526|GO:0070401
Vimu7g00357 393 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 47 393 - -
Vimu7g00357 393 Gene3D Dihydrodipicolinate Reductase; domain 2 195 361 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00357 K00145 - gmx:100801527 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00357 7 4087296 4092480 Vimu7g00357 7 4087296 4092480 ECH