Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00189 ATGAGAAGCTCGTGGTTCAATAAGTTATCCATCATTATTGGCCATAGATCCCCGGTGAACTGGTTACTCTTGTGCCTAATCAGCCTGCTTCTGCTGATTTTTGTTCTAGGTTCATCTTCTTCTAATATTGTTGATTTGGCACCTCATATTCCGGTGTCTCTCTTATACACTAATTATAGGAAGGTTAAGGAGCAAGCGGCGGTTGATTATTTAGAGTTAAGGTCTGTGGCAAGGGGTAACTCTAGACAAAGAGAATTTGACCTCTGTGGCAAGGAAAGAGAGAATTTTGTGCCTTGTTACAATGTTTCAGCCAACTTGGGAGCAGGGTTTAAAGAAGGAGAAGAGTTTGATAGGCATTGTGAACTGTTAGTTGAAGCAGAAAAGTGTTTGGTTCGTCCTCCTACGGAATATAAAATTCCCTTCCAGTGGCCAACTAGCAGGGATGTTATTTGGAGTGGAAATGTGAAGATAAGCAGAAACCAGTTTCTTTCATCTGGAAGTATGACCAAAAGGTTAATGCTTCTAGAAGAGAACCAAATTGCTTTCCGCTCGGAGGATGACGGTGTGAAAGATCACTCTCGCCAAATTGCAGAGATGATTGGGTTGGGAAGTGACAATGAGTTTCCTCAAGCTGGTGTAAGTCTTCCATTTATCATCACTTACAAGCTCTTTTCCTTTGGAGATCACTGGTTGTGGGGGGTTCGCACTATACTAGACATTAATTGTGGATTTGGTAGCTTTGCAGCTCATTTGGCATCACTGAATATAATGACAGTTTGCGTTGCTGCATATGAGGCAACAGGTAGCCAGGTTCAGCTGGTTCTTGAGAGGGGCCTTCCTGCTGTAATTGGCAACTTCGTTGCAAGAGAACTTCCATTTCCTTCATTATCATATGGCATAGTTCACTGTGCTCAATGTGGCATCATTTGGGATGGAAAAGTTGGAATTTTCCTCATAGAAGTTGACCGTGTTCTTAAACCTGGAGGATACTTTGTGCTAACCTCGACCCCAAGCATGTCAGAGGGAAGTTCATCAAAAATGAAAAGGAGGAATATGTTGAATCCAATGAAAGAACTGGCCCAGCAACTCTGTTGGACTCTTCTATCTCAGCACGATGAGCTATTCATCTGGCAGAAAACTGATGACGTTAATTGCTATGCATCTAGAAAGAAGCATGCTATACCATTATGCAAAGAATATGATGATGTTCAGTCATATTATCGGCCTCTTCAACCATGCATACGTGGGACCTCTAGCAAGCGCTGGATTGCAATACAGAACAGATCCGCTGGATCTGATTTGAGAGTTCAATCTGAAGATTATTTTGAAGACTTAGAATTCTGGAGATCAACTCTCAAGAACTATTGGTCTTTGCTTACACCACTAATTTTCTCTGATCATCCGAAGAGGCCGGGAGATGAAGATCCATTACCTCCATTTAACATGATACGTAATGTAATGGATATGAGTACTAAGTATGGGGGGTTGAACACTGCCCTTCTGGAAGAGAAAAAATCAGTTTGGGTCATGAATGTTGTTCCTGCTACAGTTTCTAATTCACTTCCTCTAATACTGGATAAAGGTTTTGTTGGTGTTGTGCATGACTGGTGTGAACCTTTCCCTACGTACCCCCGGACCTATGATATGCTTCACGCAAGTGGACTTCTTTCTCATCTCACTTCAGAGAGATGCAGCATGGTGAACCTATTCTTGGAGATGGACAGAATACTGCGTCCAGAGGGATGGGTCATTCTTTCTGATAACATGCAAATTATTGAGATGGCTCGCACACTCGCTGCACAAGTACGTTGGGAAGCAAGGGTAATTAACCTTCAGAACGGAAGTGACCAGCGGCTTCTTGTTTGCCAGAAACCATTCCTGAAAAAATGA 1890 0.4249 MRSSWFNKLSIIIGHRSPVNWLLLCLISLLLLIFVLGSSSSNIVDLAPHIPVSLLYTNYRKVKEQAAVDYLELRSVARGNSRQREFDLCGKERENFVPCYNVSANLGAGFKEGEEFDRHCELLVEAEKCLVRPPTEYKIPFQWPTSRDVIWSGNVKISRNQFLSSGSMTKRLMLLEENQIAFRSEDDGVKDHSRQIAEMIGLGSDNEFPQAGVSLPFIITYKLFSFGDHWLWGVRTILDINCGFGSFAAHLASLNIMTVCVAAYEATGSQVQLVLERGLPAVIGNFVARELPFPSLSYGIVHCAQCGIIWDGKVGIFLIEVDRVLKPGGYFVLTSTPSMSEGSSSKMKRRNMLNPMKELAQQLCWTLLSQHDELFIWQKTDDVNCYASRKKHAIPLCKEYDDVQSYYRPLQPCIRGTSSKRWIAIQNRSAGSDLRVQSEDYFEDLEFWRSTLKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMSTKYGGLNTALLEEKKSVWVMNVVPATVSNSLPLILDKGFVGVVHDWCEPFPTYPRTYDMLHASGLLSHLTSERCSMVNLFLEMDRILRPEGWVILSDNMQIIEMARTLAAQVRWEARVINLQNGSDQRLLVCQKPFLKK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00189 629 Gene3D Vaccinia Virus protein VP39 228 381 IPR029063 -
Vimu7g00189 629 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 365 IPR029063 -
Vimu7g00189 629 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 70 627 IPR004159 GO:0008168
Vimu7g00189 629 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 624 IPR004159 GO:0008168
Vimu7g00189 629 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 475 610 IPR029063 -
Vimu7g00189 629 Gene3D Vaccinia Virus protein VP39 525 617 IPR029063 -
Vimu7g00189 629 CDD AdoMet_MTases 236 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00189 Vimu-Chr7 2322536 2329861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00189 K23870 - gmx:100781425 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00189 7 2322536 2329861 Vimu7g00189 7 2322536 2329861 ECH