Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00149 ATGGAAGCAATGTTGAAATTCTCACCTCACCTTGATACCAAATCTATCTGCTATCTTTCTCCAAAACCTATGATCACTCTTCATCAAAATTTTCTTCCCCTAAAGAGATCTCGAGTGATTATGTGTTTTTCCTCTTCTCCTGGGTACTTAGATAACATCAGAAAATCTTTAATTAGGCAGGAGGATACCATAATATTCAGTCTCTTGGAGAGAGTTCAGTATTCTGATGATTCAGTACGTGACAATGATGGGCTCTTCTCGGACTATTTCGAATGGACTATTGTTGAGCACATGATCATTGAAAAGGAAAAGCTCTATGCTAAGTTGGGAAGATACAAGAGTGAGGAAGAAAACCCTTTCTTCCCTCAGCAATTACCCAGGTCAATTGTTGTACCTCAGCAATATCCCAAGATTCTGCATCGCTGTGCTGATTCCATCAATATAAATGATAAGATTTGGCCTATATATTTTACTGAAATCGTCCCAGAATTGTTAAAAGCAAGAAACAATGATGAATGTGGATCTATCATCCCAGAATTGGTAAAAGCAGGAAATAATGTTGAGTGTGGATCTATTGCTGTTTGTGACATTCTTTGCTTACAGGCTCTCTCAAAGAGAATTCACTATGGAAAATTTGTTGCTGAGGCAAAGTTTCAAGATGCCCGTTCTGAATATGAAGCTGCAATTAAAGCAAAAGACAGGAAATTACTGTTAGAGTTGGTGACATATGAAACTGTGGAGGCGATAGTGAAGAAGAGAGTAGAACTGAAGGCGAAAACATTTGGCCAAGTGGTGAAGATCGATGAAGAGAATGTAGCCAATCCTACCTATAAAATCAAGCCAAGTTTTATTCCAAAACTCTTTGAAGACATAGTTATGCCTTTCACTAAAGAGGTACAAGTGGAGTACTTGTTGAGAAGACTTGACTAA 930 0.3796 MEAMLKFSPHLDTKSICYLSPKPMITLHQNFLPLKRSRVIMCFSSSPGYLDNIRKSLIRQEDTIIFSLLERVQYSDDSVRDNDGLFSDYFEWTIVEHMIIEKEKLYAKLGRYKSEEENPFFPQQLPRSIVVPQQYPKILHRCADSININDKIWPIYFTEIVPELLKARNNDECGSIIPELVKAGNNVECGSIAVCDILCLQALSKRIHYGKFVAEAKFQDARSEYEAAIKAKDRKLLLELVTYETVEAIVKKRVELKAKTFGQVVKIDEENVANPTYKIKPSFIPKLFEDIVMPFTKEVQVEYLLRRLD 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00149 309 PIRSF Chor_mut_AroQ_eu 41 177 IPR008238 GO:0004106|GO:0009073
Vimu7g00149 309 PIRSF Chor_mut_AroQ_eu 173 309 IPR008238 GO:0004106|GO:0009073
Vimu7g00149 309 ProSiteProfiles Chorismate mutase domain profile. 41 309 IPR008238 GO:0004106|GO:0009073
Vimu7g00149 309 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 44 309 IPR037039 GO:0004106|GO:0009073
Vimu7g00149 309 PANTHER CHORISMATE MUTASE 175 309 IPR008238 GO:0004106|GO:0009073
Vimu7g00149 309 NCBIfam chorismate mutase 50 309 IPR008238 GO:0004106|GO:0009073
Vimu7g00149 309 SUPERFAMILY Chorismate mutase II 49 309 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00149 Vimu-Chr7 1850698 1852025 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00149 K01850 - gmx:100780534 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00149 7 1850698 1852025 Vimu7g00149 7 1850698 1852025 ECH