Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00075 ATGGCCACTCTTCAGAGTTGGAGAAAAGCCTATGGCGCTCTCAAAGACACCACCAAAGTTGGTCTCGCTCATGTCAATAGCGATTATGCGGAGTTGGAAGTTGCCGTAGTCAAAGCAACCAACCACATCGAGTGTCCTCCCAAAGAGAGACACCTTCGCAAAATTTTGCTCGCAACTTCTTCTGTACGGCCTAGAGCTGACGTTGCTTGCTGCATTCATGCACTTTCGCGACGGTTGGCCAAGACCCGAAACTGGACGGTGGCACTGAAAACATTAATCGTAATTCATAGGTTATTGAGAGAGGGTGATCCTACTCTTAGAGAAGAATTTCTTAATTTCGCACAGAGGGGGCGCATACTCCAACTTTCTAAATTCAGAGACGATTCTAGTCCAAAAGGAGGCACCACCAAAAGATTGTCAGTAGGAGGGGAAATCACCACTAGCATAGTTCATTTGTGGGAAAAGTATGGCATGGTAAATGCCTTTCACTCTACCCCTCCTCAATGCTATGTTTGTTTTGTAAGAGAACCAGATAATAATCAGGAGGACCAATTATCAAGTAGAGGTAACCGCCGCGAAGATTGTGAAGGAATGGGAAATCATACCAAATCCGCAGAAAAAGGAGAATCCCTCAGATATGATCACCAGCCCATGAGCCAAGCAGCCACAGGTTACTGA 678 0.4587 MATLQSWRKAYGALKDTTKVGLAHVNSDYAELEVAVVKATNHIECPPKERHLRKILLATSSVRPRADVACCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTLREEFLNFAQRGRILQLSKFRDDSSPKGGTTKRLSVGGEITTSIVHLWEKYGMVNAFHSTPPQCYVCFVREPDNNQEDQLSSRGNRREDCEGMGNHTKSAEKGESLRYDHQPMSQAATGY 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00075 225 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 133 IPR045192 GO:0048268|GO:0072583
Vimu7g00075 225 MobiDBLite consensus disorder prediction 181 225 - -
Vimu7g00075 225 Gene3D - 6 154 IPR008942 -
Vimu7g00075 225 CDD ANTH_N 32 133 - -
Vimu7g00075 225 SUPERFAMILY ENTH/VHS domain 32 131 IPR008942 -
Vimu7g00075 225 ProSiteProfiles ENTH domain profile. 24 166 IPR013809 -
Vimu7g00075 225 SMART enth_2 30 163 IPR013809 -
Vimu7g00075 225 Pfam ANTH domain 31 134 IPR011417 GO:0005543
Vimu7g00075 225 MobiDBLite consensus disorder prediction 181 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00075 Vimu-Chr7 943853 947439 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00075 - - qsa:O6P43_025860 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00075 7 943853 947439 Vimu7g00075 7 943853 947439 ECH