Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00060 ATGACTCGTGGGTTCCCCGAACATTGGCTTTACTCAGGAATATTCAAGCGAGTTGAGCTGCAAAAGGCTCTTGGAAATCACCTTGCATGGAAGGATCGGTATCCTGTGTTTTTTGATGATATTGCAGCACGTTTACTTCCGGTCATCCCCTTAATTATTTATAGACTTATCGAAAATGATGCAATGGATACAGCAGAAAGAGTATTGGCCATGTATACCCATTTGCTTGCTTATTACCCTCTAAGATTTACATTTGTTCGGGATATACTTGCATACTTCTACGGTCATCTTCCTGGAAAGCTTATTGTTCGAATCCTCAATGTACTTGATGTCAGTAAGATTCCCTTTTCAGAGTCGTTCCCGCAACAAATAAGTTCGACAAATCCAGTCATGTGCCCTCCTCTAGATTATTTTACAACTCTGTTACTGGGAATAGTGAATAATGTTATTCCTCCATTACATAACAATTCAAAATCTGGATCAATGGGAGATGCATCAAACAATACACTGCGTACTACACAAAACAAGCCTGCTGCAGTATCCCAGTCTGGGCCAGCAAATGCTTCAGAGGGCCAAAAGGCATTTTACCAAATTCAAGATCCGGGAACATACACTCAGTTGGTTCTTGAGACTGCTGTTATTGAAATACTTTCCCTTCCGGTATCTGCCTCTCAGATAGTACAATCACTTGTCCAAATTGTTGTTAATATACAACCAACCTTGATCCAGTCCAGCAATGCTCTTCATGGTGGTTCAAATAGTGTAGGGCAGGGTTCAGTGTTGCCAACATCACCTTCAGGTGGAAGCACAGATTCATTAGGTGCAAGCCGATCAACTCCTTCAGTTTCTGGAATAAATACCTCTAACTTTGCTTCTCGAAGTGGTTATACATGTCAACAACTATCTTGTTTGTTAATTCAAGCTTGTGGCCTTCTACTGGCTCAGCTTCCCTCTGATTTTCATTCACAACTTTATTTGGAAACGACACGTATTATAAAAGAGAACTGGTGGCTTAAGGATGGGACAAGGTCGCTTGGGGAAATAGATTCTGCAGTTGGCTATGCATTGTTAGATCCAACATGGGCTGCACAGGACAATACCTCTACAGCAATTGGGAATGTGGTGGCCTTGCTTCATTCTTTCTTCAGTAACCTCCCTCAAGAATGGCTTGAAGGGACCAATGTCATTATCAAGCAGCTTCGGCCTGTAACATCAGTCGCCCTGTTGAGAATAGCATTCCGTATAATGGGGCCACTCCTTCCAAAACTTGCCAATGCTCATGCACTTTTCAACAAGACTCTCTCATCATTACTAAGTATATTAGTGGATGTATTTGGAAAAAATTCCCAGACAACGATTGCTGTTGATGCGTCAGACATAGCAGATATCATTGACTTCCTCCATCATGTCGTCCACTATGAGGGACAGGGAGGGCCTGTGCAGGCTAGCAGCAAACCACGACCAGATGTTTTGGCCCTCATTGGAAGGGCATCAGAGAGTTTACGTCCAGACATTCAACATCTGCTTTCACACCTAAACCCTAATGTGAATTCCTCTGTATATGCGGCATCTCATCCTAAGTTAGTTCAGAATCCAACTTAG 1602 0.4257 MTRGFPEHWLYSGIFKRVELQKALGNHLAWKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERVLAMYTHLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDVSKIPFSESFPQQISSTNPVMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGSMGDASNNTLRTTQNKPAAVSQSGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSASQIVQSLVQIVVNIQPTLIQSSNALHGGSNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLKDGTRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVALLRIAFRIMGPLLPKLANAHALFNKTLSSLLSILVDVFGKNSQTTIAVDASDIADIIDFLHHVVHYEGQGGPVQASSKPRPDVLALIGRASESLRPDIQHLLSHLNPNVNSSVYAASHPKLVQNPT 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00060 533 MobiDBLite consensus disorder prediction 157 187 - -
Vimu7g00060 533 MobiDBLite consensus disorder prediction 253 281 - -
Vimu7g00060 533 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 2 532 IPR021629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00060 Vimu-Chr7 766563 771762 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00060 K15166 - gmx:100798789 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00060 7 766563 771762 Vimu7g00060 7 766563 771762 ECH