Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00050 ATGGGTTCTGAAGGATCCAGCGTCGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAAAGAGGTGAAAAAGGAATCGGGGATGGGACTGTTAGCTATGGAATGGATGATGCTGATGACATATACATGCAGTCTTGGACAGGGACTATTATTGGCCCCCCTGGTCGGCGGGTGTCATTGAGGGCGTTTGGCGATTCCGGCGAGAACATCGATGAGGAGGAGATTGATGGTGGTCCGCGACGGCGCTCTTGGCCGACTGTTCATGAAGGACGAATCTACCAGTTGAAATTATTTTGTGGCAAGGATTATCCAGACAATCCTCCATCTGTTCGATTTCAAACAAGGATTAACATGACATGTGTCAATCAAGAAAGTGGAGTGGTTGAGCCACATTTGTTTCCTATGCTTGCCAATTGGAAACGTGAGCGAACAATGGAAGACATTTTGTTGCAATTGAAGAAAGAAATGATGTCAGCCCAAAATCGGAAGCTAACTCAGCCTCCTGAAGGTGCATCTATCATATTTTTATTGTTGCTATTTGTTTATATATTTTATAAATTGCTATAA 570 0.4351 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGRRVSLRAFGDSGENIDEEEIDGGPRRRSWPTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQESGVVEPHLFPMLANWKRERTMEDILLQLKKEMMSAQNRKLTQPPEGASIIFLLLLFVYIFYKLL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00050 189 Gene3D Ubiquitin Conjugating Enzyme 2 174 IPR016135 -
Vimu7g00050 189 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 44 162 - -
Vimu7g00050 189 SUPERFAMILY UBC-like 11 170 IPR016135 -
Vimu7g00050 189 Pfam Ubiquitin-conjugating enzyme 87 159 IPR000608 -
Vimu7g00050 189 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 189 IPR000608 -
Vimu7g00050 189 SMART ubc_7 14 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00050 Vimu-Chr7 633511 641024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00050 K10704 - gmx:100499899 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00050 7 633511 641024 Vimu7g00050 7 633511 641024 ECH