Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04439 ATGGACCAAACTCAAAATGAGTCAGGCTGGATGCATTCTATCAAAGTAACATTGGGGTCTCTAGATCACAGAGAGGTTAAGTCCTTCATCAGCAGCATTCCTAGTGTTTCAAGCAAGCTTAGGAAATCCAACGAGGAGGCGTACTCACCAAAGTTTGTCAGCATTGGACCCTTACATAGGGGAACAAGTAGCCACCTTCTGGCCATGGAAGAGCACAAATGGCGTTACATGCTAGCTCTTCTTCACAGAACTCAAAATCCAGTTTCAACCTTGGATGAGTGCGGCACAGTCATTCTTGGCTTGGACGATGCAGTTCGTGCAAGCTACGGAGGTAACATCAAATATGACCCCCATGAGCTAGCCAAAATAATGTTACTTGATGGCTCCTTCTTGTTAGAACTTCTCCTTAGATGTGCACCACCAAACATGGTACCTCAAATTCCAAAAGAAGAAAACCATAATGGTTCTTCTTCAGATCTAATACTAGGACACAAAGAAGTGTTCATATCTATTCTGACTGATTTCACTCTTCTAGAGAACCAAATGCCCTTTTTTGTTCTCAAGACATTGGCAAGGGTACTTTTTCCAGAGGTCTTCACAAGTGAAGCTGATCATCTTGTTGCTGATCTCACACTGTCTCTCTTCAGCTACCCTTTGATCCGCTGTCCTAGTGTGGCACACTTTCTGCATCTCATGCACTTGTCCTCCATTGTTGATGAGGGGCAAAAGGTGAAGAAAGCGCAGCAAGAGCTAAAGCGTTGCGCCACAAGGCTTAGAGCTGCTGGTGTATCAATTAGGAAAGTAGAGAGGCACAGCAAACTGGTTCACTGGTTTGGCTTTGACATAAGATTTGCAAAAGGGGTGCTTGAAATCCCTCCACTTCACGTTGTTGAAACAACAGAGGTATATTTGAGGAATTTCATTGCATGGGAACAAAGCAGAATTGGCATCAACAGGCAATTCACTTCTTATGCATTGTTTCTTAAAGGGTTGATGTGTTCCTTGCAAGATATTGAGCTGCTTGTGGACAGTGGTGTTTTGGTCAAAGATACTAAGATCAGCAACAGAGACTTGCTCACTTTGTTTGGCACAATCACGAAGGGGGTGGACCAGATGGACTCTAGTTACAGTAAACTTTGTGAAGACTTGAATGCTTACTCAGCAGTGAATCATTTGAGAAAGTTTCCTATACTGATATGGCATTGTTGCAACCTTTGTGTGGAATGCATCAGATACTCTTGCAAACACAGCTATAAAATCTTGATCAGGGATCATATACCAAATGTGTGGAAACTGATAGGAATTTTGGTAGCTGCAGTGCTGCTTGCTCTTACCATTATGCAGACCTACTATTCATCCCGTGCCTGA 1368 0.4313 MDQTQNESGWMHSIKVTLGSLDHREVKSFISSIPSVSSKLRKSNEEAYSPKFVSIGPLHRGTSSHLLAMEEHKWRYMLALLHRTQNPVSTLDECGTVILGLDDAVRASYGGNIKYDPHELAKIMLLDGSFLLELLLRCAPPNMVPQIPKEENHNGSSSDLILGHKEVFISILTDFTLLENQMPFFVLKTLARVLFPEVFTSEADHLVADLTLSLFSYPLIRCPSVAHFLHLMHLSSIVDEGQKVKKAQQELKRCATRLRAAGVSIRKVERHSKLVHWFGFDIRFAKGVLEIPPLHVVETTEVYLRNFIAWEQSRIGINRQFTSYALFLKGLMCSLQDIELLVDSGVLVKDTKISNRDLLTLFGTITKGVDQMDSSYSKLCEDLNAYSAVNHLRKFPILIWHCCNLCVECIRYSCKHSYKILIRDHIPNVWKLIGILVAAVLLALTIMQTYYSSRA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04439 455 PANTHER BNAC04G53230D PROTEIN 32 452 - -
Vimu6g04439 455 Pfam Plant protein of unknown function 33 444 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04439 Vimu-Chr6 49778521 49780668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04439 - - gmx:100810805 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04439 6 49778521 49780668 Vimu6g04439 6 49778521 49780668 ECH
Vimu6g04439 6 49778521 49780668 Vimu9g01239 9 20275363 20277530 PCT