Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04399 ATGAATCCTACTACCACTCAACCCCCACCGCCTTCGTTGCCACCGCCGTCGCTACCACCACCGCCGCCTCAGCTCCAGCCTCACCGCCCCTCCACCTCCTGCGACCGCCATCCTCAGGAGAACTTCACCGGCTTCTGCCCTTCATGCCTCTGCGAGCGCCTCGCCGTGCTCGATCCCAACTCTTCATCCTCTTCCGCCGCCGCACGCAAGCCTCCGAGCTCCTCCGCCGCCGCTGCCGCCCTTAAGACCATCTTCCGCTCCTCCGTCGCCTCGCGCCGCCCTCCTCCATCCTCCCTCCCGGAGCTCCGCCGCACCAAGTCGTTCTCGGCCTCCAAAAACGAAGCCCTTTCCGGTTTCTTCGAACCGCAGAGAAAATCCTGCGACGTAAGAGGTCGGAGCACCCTGTTCACCCTCTTCAACCAGGAAGCCGAAGTCGAAACACGCCACCTCCCCTCCTCCTCCGTGGTTCAGAAACCCGTCCTTGAGTCCAAAGAGGAAGACGACGACGACGAAGACGAAGAAAAAGATAACATTGTCGTTCACGACGTAACCGACATTAAAGTTCCCGAATCTCCTCAACCCCAACCAGCTAACGCGGAAACTAGAGTTTCAGAAATTGTAGAAGAGGAATCAGAAACAGTTCCTGAACCCGCAGAAGCTGACGTGGCAGACGAAGAGGCTCTGAAGGCGATGAAGGACCACATGGATCTGGACTCACAAACGAAGAAAACCTCTGGTCGAGACCTGAAGGGAAGTTTCTGGTCAGCGGCTTCGGTCTTCAGCAAGAAGCTTCAGAAGTGGAGGCAGAAGCAGAAGATGAAGAAGCGTGAGCGGAACGGCGTCGTTGTGGGCTCCGGCACTCTGCTCCCCGTCGAGAAGCCCATTTCTCGCCAATTCCGCGAAACGCAGTCGGAGATCGCTGACTACGGCTTCGGCCGCCGCTCCTGCGACACCGATCCGCGCTTCTCGCTCGACGCCGCGCGAATGTCGTTCGATTTCGAGGAGCCGCGCGCCTCCTGGGACGGTTATTTAATGGCAAGGACTGCGCCTACTCTCGCCGTTCCTCCGAGGATGCCTACGATGATCGAAGACGCGCCGGCGCCAGTTCAGGTTCTCAGGACCGATTCCCTTATTCCCGTGGAGGAGCCTGAATATGAGGAGACTCTCACTCTTAATCTTAATCAAAATATTAATTTTAGTGTTAATCATAATGTTAATACTAATCCTAATCTCCCTGGTGGTTCTAATCAGACGAGGGAGTATTATTCGGACTCTTCCTCTCGGAGGAGGAAGAGTCTTGATAGGTCTAGTTCAATTAGAAGGACTGCTGCTGCTGTTGTTGCTGAAATGGACGAGTTGAAGAGTGTTTCGAATGCCAGTGCCACTACCAATGCTAAGGTTACTCCTGCTGCTTCTGCTGATTATGTGCACAATCCCTTGAGGGACTCCAATTTGAATTCGAATTCTTTGAGGGATGATGGTTGTGAGAAAGGGGCTTCCAAGAAGTCATCGAGCCGGTGGAGCAAGGCGTGGAGTATATGGGGATTGATTCATCGGAGAGGGAGTAAGGAGGAGGATGGTGGAGGGAATGGGAATGGGAATGGGAATGGCGTGGAGAGGTCGTACTCAGAGTCATGGCAGGAGTATAGAGGTGGGGAGAGAAATGGGGATGTTAGAGGTGGTGGTTTTAATCCGAAGATGATGAGGAGTAATAGCAGTGTGAGTTGGAGGAATGGGCAGGGTCTAGGTAGTGGAGGGTTTGGAAGTGTGAGTATGAGGAAGAGTGATGTGCAGGGGAATGGGCTTGGCCTTGGTGTTGGTGTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGGAAGGGGAGGGATGAGTTTGTTGGGTTGGAGAGGAACCGGAGTGCAAGATACTCGCCAAACAGCATCGATAACAATGGTCTCCTGAGGCTCTACTTGGGCGGCCGGAGAAACGGGTCCGGGAAAGGAAGGTCGAACCAGGCACATTCTATAGCCAGGAGCGTTCTCCGGCTGTATTGA 2055 0.5489 MNPTTTQPPPPSLPPPSLPPPPPQLQPHRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNSSSSSAAARKPPSSSAAAAALKTIFRSSVASRRPPPSSLPELRRTKSFSASKNEALSGFFEPQRKSCDVRGRSTLFTLFNQEAEVETRHLPSSSVVQKPVLESKEEDDDDEDEEKDNIVVHDVTDIKVPESPQPQPANAETRVSEIVEEESETVPEPAEADVADEEALKAMKDHMDLDSQTKKTSGRDLKGSFWSAASVFSKKLQKWRQKQKMKKRERNGVVVGSGTLLPVEKPISRQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDFEEPRASWDGYLMARTAPTLAVPPRMPTMIEDAPAPVQVLRTDSLIPVEEPEYEETLTLNLNQNINFSVNHNVNTNPNLPGGSNQTREYYSDSSSRRRKSLDRSSSIRRTAAAVVAEMDELKSVSNASATTNAKVTPAASADYVHNPLRDSNLNSNSLRDDGCEKGASKKSSSRWSKAWSIWGLIHRRGSKEEDGGGNGNGNGNGVERSYSESWQEYRGGERNGDVRGGGFNPKMMRSNSSVSWRNGQGLGSGGFGSVSMRKSDVQGNGLGLGVGVGGGGGGGGGGGGGGGGGRKGRDEFVGLERNRSARYSPNSIDNNGLLRLYLGGRRNGSGKGRSNQAHSIARSVLRLY 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04399 684 MobiDBLite consensus disorder prediction 1 37 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 521 580 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 423 437 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 144 159 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 479 493 - -
Vimu6g04399 684 Pfam Protein of unknown function (DUF740) 21 662 IPR008004 -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 472 503 - -
Vimu6g04399 684 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 22 681 IPR008004 -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 404 422 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 566 580 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 85 110 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 144 220 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 1 28 - -
Vimu6g04399 684 MobiDBLite consensus disorder prediction 404 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04399 Vimu-Chr6 48883737 48887155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04399 - - gmx:100799446 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04399 6 48883737 48887155 Vimu6g04399 6 48883737 48887155 ECH
Vimu6g04399 6 48883737 48887155 Vimu9g01097 9 18398085 18401453 PCT