Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04394 ATGAATTTCAGGAGCTTGGAGGATTTCTGGGCCTTTTATGTCAACCAGCATTCCAAACCATCCACGAGGAGGTGGCACTTTGTGGGCACGCTCTTCAGCATCTTCTTCTTGCTCTGTTCTTTTTTCTTCAGCTGGTGGTTCTTGTTATTTGTGCCTTTTTCTGGGTATGGTTGTGCCTGGTACAGTCACTTCTTTGTGGAAGGGAATGTTCCGGCAACTTTTGGACACCCCTTTTGGTCGCTCTTGTGTGATTTTAAGATGTTTGGATTGATGCTTACTGGGAAAATGGATAGAGAGATCAAGAGGCTTGGGAAAAGACCTGTGCTGCAAGTTTTCTGA 339 0.4513 MNFRSLEDFWAFYVNQHSKPSTRRWHFVGTLFSIFFLLCSFFFSWWFLLFVPFSGYGCAWYSHFFVEGNVPATFGHPFWSLLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04394 112 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 3 96 IPR009305 -
Vimu6g04394 112 PANTHER TRANSMEMBRANE PROTEIN 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04394 Vimu-Chr6 48689524 48694144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04394 - - gmx:100818649 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04394 6 48689524 48694144 Vimu6g04394 6 48689524 48694144 ECH
Vimu6g04394 6 48689524 48694144 Vimu9g01094 9 18295218 18297777 PCT