Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04340 ATGGGGTTTGGTTTAACCCTTGGAAAGAAAAGCTCAAAACAGCAAAGCAGGTCAAAGTCATCAAAGGATGGTTCTAGTTTGCTCCAACCCAATCCACCTCCAAGGGACTCACTTAAGTTAAAATCAAAGTCTATTGTTGATCAAACAAGCATTGATTCTGGTTATAAAGCAAAGCATGACATAGTAAGAAAGGTTCAGCACTTGGATAGTGCAAAGGGAAGTTCAACTCCACCTGATGAACTTGTCAAGTACATGTCTAGTTTGCCTGGATTTCTCAAGCGTTCTGATGGAGGAGAAAGCATTCAAGGGAAGGCTTTAAATGTTGGGGTTCTTGATTGGTCTAAACTTGAAAAATGGAAGAGCAAGCAAACGCATACAAAGGCAGAAGCTAGCAATTTCACATCATTCAATAGCAGTAAAGAAGCGTTACCAACGGCAGCCACCACATCATCATCTACCATTTCTGTTGGCCATAATAGAAAGCTTGATGGTAAAAAAGGTACGAGTTCTTCAAGATACAAGGGATCTTATAAAGAAGACCTTGCTATAAATTCTAAAATGTCTTCTCAGAATGCCAAACAATATCTACATTCTGAAATTAAAACAAAGACCATTGGAGATGAGCTCGGAATGTCAATTACATCACTTCAAAGGGTGAAAGTTAATTACTATGATGAAATAACTTCAGCAGTTGGAAGCTCTGCATCTAAATCCAGGCATCATGGGATCCCAGTAGTTTCTAATGAAAATTCTAGTGGTAGGAATATTGAAGATGAGATGAGAATGGAGGGTTTGCATCCACATAGCCTCAAGAAAAAGGAGAGAAATCGGAAGCCTAGTTCTGAAAAGAGATTTTCATCCTTAGAATCAAAAAAGAAAGGTGTGTTATTTCGTTCTCAGCATCAAACGAGTTCTAGCAGCAGTGAACTCAAGAACAAGATGAATCAGTGGCAGGAATCAGATATTGATGCTGATCATAAACAAAGTCATAGGATGCCTGGTAATATTGTGTTGCTTCGTCCCAGAAAAGTTCTGCAATTGAAATCTGAAGACTATTTTCAGCATTCTCAATCAAGAACCTCGTCTGATGAAGACCTTGCGGAATCAAGCCGGAGTAGTTTGTCATATATGTCAATTCAGGAGGTTTACACTGAAGATTTACATTCTGAAATTCCACATTCTGTGGCTGAGCTTGTTTCCTCAGAAACACTGCAACAGAGTAATAATACCGATCTAGATATTGGTCGGTCTTCTGGTGTATATAAGAAAGCATCTTGCTCAAATAACACATTCAGTTTCCAATCTCAAGATATATGCATTGAAAAGGACGTGTTAGATAACAAGTTAAAAAATCAGTGTGCTTTCAGTAATGTGCTGGAATCACGGGACCATGAAATTCCTCAGCCGACACCTACGAATTCCTCATCTAGTCGTCGACTTAGCTTAAGCTTAAGTCGGATTGGGAGAAGTTTCAGTTTCAAGGAAGGTTCTATTCCAAAACTTAGCTCCATGCATGTGAGTTCAAAGTCTGGTTCAGTGACACCAGAATCTTCTGCTTGTTTGGAAAACCATACCAAATATAAAGTAAAAGGCCATAACAGAACCAGGTCGAGCCCCTTGTTAAGGTTATTAGACCCCATATTAAAGCATAAGACATCAAGCATACACTATTCAGATGAACACAGTGTGACATCAAAAGGAAGCATAGATTCGATCAGCTTGAGGACAATTAATCTGCCTGATGAAAAGAGTAAGGAATCATCGTTCCAAGCTCTTTTGCAGTTAACTATAAGAAATGGAGTACCTCTGTTTAAATTTGTGATCAACAGTGAAAGAAAGGTTCTTGCCGCTACCACGAAGAGTTTAACATTGCAGGAGAAGGATGATTTAGACTGCTATTTTACATTCTACGTTGTTAATGAAATGAAGAAAAAGAGTGGCAAATGGATGAGTCATTGGAGTAAAGAAAAAAACTGTGGATATGCCTACAATATGGTTGGTAAGATGAGGGTTTCTAGCTCTAAAATCGCTGAATCAAACAATGAGAACTCCAAGAGAGAGAGAGTGGTGAAAGAATATGTCCTAATGGGAGTTGAAGTTGACCAGCTAGATCGAGAAACACCACAGTTCTTCATGAGCAAGGAGCTTGCAGCTGTTGTTACCGAGACTCCTTGTGAAAGCATAAACCATGAAGGACCACTATATAGTCATAATTTGCCGGGGAAGAGATGCCTTAAGTGCTTGGCAGATGAAAAACGTTTTTGCATAGCACAAGAAAATGATATCTATGGCAGCATTAAAGTTATACTTCCTGGTGGAGTACATAGTTCACCAAACACTGGAAAACCTTCACCATTGATCCAAAGATGGAAGTTGGGGGGATCATGTGATTGTGGAGGTTGGGATGTTGGTTGCAAATTGCTTGTTCTCTCTAACCAAAACATCAGTTCAAATATTCCAAGGATTTCAAAATCTTACCCAGAGAGATTTCATCTTTTTGTTCAGGAAGGAGCTGAGGAAAACACTCCCATATTCACTTTGCTGCCATTGAAGGATGGATTCTATTCGGTGGAATACAGTTCAACTATCAATCATTTACAAGCATTCTTCGTTTCTGTGATAGTTTTAGGCAATCAGAAATTACAGAGTTCCTTGGAAATGAATAACATACAAGAAGCAATCGATAAGGGATTCAGTTCCAAGAACAACCAGGAACTTCAGGGTAAAGCAGCTTTATATTATAATCCAATTCCTCCATACTCCCCTGCTGACAGAGTTTAA 2781 0.3898 MGFGLTLGKKSSKQQSRSKSSKDGSSLLQPNPPPRDSLKLKSKSIVDQTSIDSGYKAKHDIVRKVQHLDSAKGSSTPPDELVKYMSSLPGFLKRSDGGESIQGKALNVGVLDWSKLEKWKSKQTHTKAEASNFTSFNSSKEALPTAATTSSSTISVGHNRKLDGKKGTSSSRYKGSYKEDLAINSKMSSQNAKQYLHSEIKTKTIGDELGMSITSLQRVKVNYYDEITSAVGSSASKSRHHGIPVVSNENSSGRNIEDEMRMEGLHPHSLKKKERNRKPSSEKRFSSLESKKKGVLFRSQHQTSSSSSELKNKMNQWQESDIDADHKQSHRMPGNIVLLRPRKVLQLKSEDYFQHSQSRTSSDEDLAESSRSSLSYMSIQEVYTEDLHSEIPHSVAELVSSETLQQSNNTDLDIGRSSGVYKKASCSNNTFSFQSQDICIEKDVLDNKLKNQCAFSNVLESRDHEIPQPTPTNSSSSRRLSLSLSRIGRSFSFKEGSIPKLSSMHVSSKSGSVTPESSACLENHTKYKVKGHNRTRSSPLLRLLDPILKHKTSSIHYSDEHSVTSKGSIDSISLRTINLPDEKSKESSFQALLQLTIRNGVPLFKFVINSERKVLAATTKSLTLQEKDDLDCYFTFYVVNEMKKKSGKWMSHWSKEKNCGYAYNMVGKMRVSSSKIAESNNENSKRERVVKEYVLMGVEVDQLDRETPQFFMSKELAAVVTETPCESINHEGPLYSHNLPGKRCLKCLADEKRFCIAQENDIYGSIKVILPGGVHSSPNTGKPSPLIQRWKLGGSCDCGGWDVGCKLLVLSNQNISSNIPRISKSYPERFHLFVQEGAEENTPIFTLLPLKDGFYSVEYSSTINHLQAFFVSVIVLGNQKLQSSLEMNNIQEAIDKGFSSKNNQELQGKAALYYNPIPPYSPADRV 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04340 926 PANTHER EXPRESSED PROTEIN 76 322 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 254 296 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 8 32 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 231 253 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 297 312 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 139 173 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 1 43 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 231 312 - -
Vimu6g04340 926 MobiDBLite consensus disorder prediction 139 158 - -
Vimu6g04340 926 Pfam Domain of unknown function (DUF3527) 756 876 IPR021916 -
Vimu6g04340 926 Pfam Domain of unknown function (DUF3527) 589 715 IPR021916 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04340 Vimu-Chr6 47240632 47243505 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04340 - - vun:114185444 1617.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04340 6 47240632 47243505 Vimu6g04340 6 47240632 47243505 ECH
Vimu6g04340 6 47240632 47243505 Vimu9g01201 9 19728167 19733511 PCT