Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04220 ATGGAGTACGAGGACCGCTTCAGACAGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTAAGCACTGGAATTGCAAAAGCGTGTGGCCAAAATATTAAAGTGTTCTCTGTAATGTGTTTACTCTTTATGTATGTTGTTGACACGAGTGGTACCATTGATCTAGATTATATGGTGGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTGTACAAGAACTATGGGACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCACAGGTACATGACCGATTTTTCTGATTGTTTTTACCCCCATTTGATTTCTTTACGTGTTTTGTGGTGTTTTGTTCATGGAAGATTACCTTATGAGAACTTGAAACCAGACCCAGTTCTGAGGAACCTTTTGCTGAGCCTGCCCTATAGGAAACTAATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAAGCACTCAGCAGGCTTGGATTAGAGGACTGCTTTGAAGGAATCATTTGCTTTGAGACGCTTAATCGCATCCATAAAAACACTGTCTCTGATGATGAAGATGACATTGAGTTTGTGGGGGATTCAAACACAACCAATCCAACCACAAAAAAAGATGCCAGAACCTCACAAATCTTTGACATCATTACCCACTTTTCTCAATCCAATCCCAACACAGTTTTGCCAAAGACACCTATTATTTGCAAACCATCAGAACATGCCATTCAATTGTCTCTCAAGATAGCCAACCTTAACCCGCAAAGAACTTTGTTCTTTGAGGACAGTGTCCGCAACATACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTGGAGAGCATCCACAACCTTAGAGAGGCTGTGCCAGAACTATGGGAAGATGACATAAAATCAGAAGTTGCTTACCCTGGAAACCTTGCTGTGGAGACATCTGTGACTGCTTAG 1035 0.4068 MEYEDRFRQNQRPKYDCLLFDLDDTLYPLSTGIAKACGQNIKVFSVMCLLFMYVVDTSGTIDLDYMVEKLGIEKSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHRYMTDFSDCFYPHLISLRVLWCFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHAVKALSRLGLEDCFEGIICFETLNRIHKNTVSDDEDDIEFVGDSNTTNPTTKKDARTSQIFDIITHFSQSNPNTVLPKTPIICKPSEHAIQLSLKIANLNPQRTLFFEDSVRNIQAGKRVGLHTVLVGKSQRIKGADYALESIHNLREAVPELWEDDIKSEVAYPGNLAVETSVTA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04220 344 NCBIfam HAD-IA family hydrolase 250 295 IPR006439 -
Vimu6g04220 344 Gene3D - 129 322 IPR023214 -
Vimu6g04220 344 Gene3D - 60 117 - -
Vimu6g04220 344 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 130 343 - -
Vimu6g04220 344 SUPERFAMILY HAD-like 14 323 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04220 Vimu-Chr6 44128585 44131251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04220 K07025 - gmx:100795391 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04220 6 44128585 44131251 Vimu6g04220 6 44128585 44131251 ECH
Vimu6g04220 6 44128585 44131251 Vimu9g01263 9 20558955 20560956 PCT