Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04033 ATGGCAGTTATTGGAAGTTTTACATTATTCCTTGGATTTGTTATTGATCGAATCCACCATTATCTTCAAAAACTTGTTAATTTAAGGAGTAATGCAAGAACTTCAAACCAAGAATTAGAAAACCTGAAAAAGGAAGCTGTGCAACTTAAAGAAAAGGATGAGAAAGCTTCCAAGGAGATACAACAGCTTAAGGAAGAACTTTCGCGGGTGGTCGAAAGTTTGAAAAAGATAAAATTGGAATTTGAAGAGAAGGACAAGAAAGTTGAGACTGCTGAAGCACATGTTGCTTCCCTCCAAAAGCAAGCTGCAGATCTACTACTTGAATATGACAGACTCTTAGAAGAAAATCAAAATCTGCAGGCTCAAACACTGGGACACAAGAGTTGA 387 0.3695 MAVIGSFTLFLGFVIDRIHHYLQKLVNLRSNARTSNQELENLKKEAVQLKEKDEKASKEIQQLKEELSRVVESLKKIKLEFEEKDKKVETAEAHVASLQKQAADLLLEYDRLLEENQNLQAQTLGHKS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04033 128 Gene3D - 58 119 - -
Vimu6g04033 128 PANTHER BCR-ASSOCIATED PROTEIN, BAP 6 120 IPR008417 GO:0005783|GO:0006886|GO:0016020
Vimu6g04033 128 Coils Coil 22 122 - -
Vimu6g04033 128 FunFam B-cell receptor-associated protein 29 56 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04033 Vimu-Chr6 40349739 40350841 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04033 K14009 - gmx:100793884 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04033 6 40349739 40350841 Vimu9g01347 9 21729000 21732428 PCT