Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03848 CGGACTTATCTGAGAGTCTCTTTCACAAGCAATCGCTATTATGCTATATATGCCATTCAACTAAACTTCTCAACCTCCTCTAATTACCTTCTTCCTAACACCACCACCATGGGAACCGAGACTCCAACTACTCAAAAGTTTGATTCCTCAGAACCTGAGATTGATAAGAGAACTGCGGAGCAGAAAGCAATCGATGATTGGCTTCCCATAACTTCTTCAAGGAACGCAAAATGGTGGTACTCAGCTTTTCACAACGTCACTGCCATGGTAGGAGCTGGAGTTCTCAGCCTTCCTTCTGCCATGGCAAATCTTGGATGGGGTCCTGGTGTGGTTATTCTTGTGCTGTCATGGATTATCACTCTGTACACACTGTGGCAAATGGTTGAGATGCATGAGATGGTGCCTGGGAAAAGGTTTGACAGGTACCATGAACTGGGGCAGCATGCGTTTGGGGAAAAGCTGGGACTGTGGATTGTGGTGCCTCAGCAACTGATATGTGAGATTAGTGTGGACATTGTGTACATGGTCACTGGAGGAAAATCACTGCAGAAAATTCATGACCTTGTCTGCAAAAATAACTGCAATAACATGAAAACCACTTACTTCATCATCATCTTTGGCTCTGTTCATTTTGTTCTCTCTCACCTTCCCAACTTCAATGCCATCTCCGGCATATCTTTGGCTGCCGCAATCATGTCTCTCAGCTACTCAACGATTGCATGGGTGGCTTCGGTGGAGAAGCATGTTGGGAATCCTCACAAAGAGGTGGAATATGGGTACAAGGCGAGCAGTTCAGCAGGAACATTTTTCAACTTTCTGAATGCGTTGGGTGATGTGGCTTTTGCCTATGCTGGACACAATGTGGTGTTAGAGATTCAAGCAACCATCCCTTCAACACCAGAGAAGCCTTCAAAGGGTCCCATGTGGTGGGGAGTTTTGGTGGCCTACTCAGTCGTCGCCTTGTGCTACTTTCCTGTTGCTCTCATTGGCTATTGGGTCTTTGGCAACTCTGTTGAAGACAACATCCTCATCTCCCTCAACAAACCCACTTGGCTCATAGTGACTGCTAACATGTTTGTCGTCATCCATGTCATAGGAAGCTACCAGCTCCCCTGCATTATGTGGCTTGCTATTTACAAACCTAGGAAGTTCAGCTTATCCTGGATCACGAACTGGATTTGCATTATACTTGGCTTCCTACTCATGATTCTAGCACCAATTGGCGGATTAAGGAGTATCATACTCAATGCCAAGACCTATGGGTTTTACCAGTGA 1275 0.458 RTYLRVSFTSNRYYAIYAIQLNFSTSSNYLLPNTTTMGTETPTTQKFDSSEPEIDKRTAEQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPSAMANLGWGPGVVILVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLICEISVDIVYMVTGGKSLQKIHDLVCKNNCNNMKTTYFIIIFGSVHFVLSHLPNFNAISGISLAAAIMSLSYSTIAWVASVEKHVGNPHKEVEYGYKASSSAGTFFNFLNALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWWGVLVAYSVVALCYFPVALIGYWVFGNSVEDNILISLNKPTWLIVTANMFVVIHVIGSYQLPCIMWLAIYKPRKFSLSWITNWICIILGFLLMILAPIGGLRSIILNAKTYGFYQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03848 424 PANTHER OS05G0424000 PROTEIN-RELATED 69 369 - -
Vimu6g03848 424 Pfam Transmembrane amino acid transporter protein 75 372 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03848 Vimu-Chr6 37357488 37365154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03848 59 370 Organic Solute Cotransporters AT1G24400 78.526 1.19e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03848 K26385 - gmx:100790838 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03848 6 37357488 37365154 Vimu6g03848 6 37357488 37365154 ECH