Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03847 ATGGAAAATCAGTTACCAGTTGAAAATAATTATCTCAAAAACACTACTGAAGAAGAATTGCAGAGGCAGAAGGCAATTGATGATTGGCTTCCAATCACTTCTTCAAGGAATGCAAAATGGTGGTACTCTGCCTTCCACAATGTCACTGCCATGGTTGGGGCTGGTGTTCTTAGTCTCCCCTATGCCATGTCTGAGCTAGGATGGGGTCCTGGTGTAACCGTACTTGTTCTGTCATGGATCATCACCCTTTACACTCTATGGCAAATGGTTGAGATGCATGAAATGGTTCCTGGAAAACGTTTTGACAGATACCATGAACTAGGGCAGTATGCCTTTGGGGAAAAGCTAGGACTTTATATTGTGGTGCCTCAACAGCTTGTGGTTGAAATTGGGGTGAACATTGTCTATATGGTCACTGGGGGGAAATCCTTGCAGAAATTCCATGACACTGTGTGTGATGACTGCAAAAAGATCAAGTTGACCTTCTTCATTATGATCTTTGCATCTGTTCACTTTGTGCTGTCTCACCTGCCTAACTTCAACTCCATTTCTGGTGTATCTTTGGCAGCAGCAGTTATGTCCTTGAGTTACTCTACCATTGCCTGGGCAGCTTCTGCTCACAAGGGTGTTCAAGAAGATGTACAATATGGTTACAAAGCTAAAAGTACATCAGAAGGAGTGTTTAACTTTTTTAGTGCCCTTGGTGATGTTGCTTTTGCCTATGCTGGACACAATGTGGTGTTGGAAATCCAAGCAACAATTCCATCTTCTCCAGAGAAACCATCCAAGGGTCCTATGTGGAAAGGAGTGATTATTGCTTACATAGTTGTGGCTCTGTGCTACTTCCCAGTTGCCCTTATTGGTTACTGGATGTTTGGAAATGGGGTTGAAGACAACATTCTCATCAGTCTAGAGAAACCAAAATGGCTTATTGCAATGGCCAACATGTTTGTTGTCATACATGTTATTGGAAGTTATCAGATTTATGCAATGCCAGTGTTTGACATGATCGAAACAGTGTTGGTGAAGAAGCTGAACTTCAAACCCAGTCGAATGCTTCGTTTTATTGTACGCAATTCATATGTGGCTCCCTTGCGTCATGTGGCTTGCAATCTACAAACCAAAGAGATTCGGCTTGTCTTGGTGGAGCAACTGGATATGCATTGTGTTTGGCCTTTTCTTGATGATTCTATCTCCAATTGGAGGATTGAGGTCCATCATAATCAGTGCCAAGACCTACAAGTTTTTCTCATAAAATCGTTCCTCGCTGAATCAATGCGTGGATCTAAAGCATGCAAATTCAAGAAAGGAACGAAAGCTCAATAA 1326 0.4223 MENQLPVENNYLKNTTEEELQRQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSELGWGPGVTVLVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLVVEIGVNIVYMVTGGKSLQKFHDTVCDDCKKIKLTFFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWAASAHKGVQEDVQYGYKAKSTSEGVFNFFSALGDVAFAYAGHNVVLEIQATIPSSPEKPSKGPMWKGVIIAYIVVALCYFPVALIGYWMFGNGVEDNILISLEKPKWLIAMANMFVVIHVIGSYQIYAMPVFDMIETVLVKKLNFKPSRMLRFIVRNSYVAPLRHVACNLQTKEIRLVLVEQLDMHCVWPFLDDSISNWRIEVHHNQCQDLQVFLIKSFLAESMRGSKACKFKKGTKAQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03847 441 PANTHER OS05G0424000 PROTEIN-RELATED 35 370 - -
Vimu6g03847 441 FunFam Lysine histidine transporter 1 33 380 - -
Vimu6g03847 441 Gene3D Amino acid/polyamine transporter I 33 337 - -
Vimu6g03847 441 Pfam Transmembrane amino acid transporter protein 37 370 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03847 Vimu-Chr6 37341814 37345061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03847 14 363 Organic Solute Cotransporters AT1G24400 79.143 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03847 K26385 - gmx:100791368 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03847 6 37341814 37345061 Vimu6g03847 6 37341814 37345061 ECH