Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03686 ATGAGGCAGCACAAGCAGGTTTCAGCCCTTAACCGACGACCCAGCGTCCTTTATCTGGTGTGCGCGGCTGCGTTGTTCTCCCTCCTCCTCTTCTGTATCCAATCCTCTCTCTTTGCAGGGTCCGTTTCTTCAGCTCACAAATCCGAAATTATCCGTGTCTTGTCTAACTTTCAGTCCAGTGTTCAGCAATGTGTGGATAAGAGGGGGCTAGGACTCACTGCTCATATAATTGACCATTGTAATTTGATCCTTAAATACCCTGAAGGTACTAACAGCTCTTGGTACAACGCACAGTTTAAGCACTTTGAGCCGTTGGAGTACAAATATGATGTGTGTGAGGCAATCCTGTTGTGGGAACAGTATCGGAACATGACAACTGTGTTGACCAGAGAGTATCTTGATTCTCGACCTGGTGGTTGGATGGATTACGCACCACAAAGGATAGCACAGTTGGGGACAAAGAAGTGCACCAACAAGACTCTTTGTGAAGAGAACCTCAATGTGTTATTACCTGCAAAGCCCCCATTTCACCCACGGCAGTTCCGAACTTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGCAGACTACATTCGGGAAAGAAATTGATAGCCATGATGCTGTTATTCGGGACAATGAGGCCCCTGTTAATGAGGAATATGCCAAATACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTCAGAGGTGCTGCGCGTAACATGGTCCCTATTCTAAAAGGATCTGACACTGAGGTTCTCATAATCAAAAGTCTGACACACAGAGAAATCAATGCAGTTATAAAGACCATACCCAATCCAGTCTATCTCTTCCAAGGAATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAGTTAGCGCTCTCCATGTGTGATATCATTGATATATATGGATTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTAAGCCTAGGAAGGGACACAATCCACTTCAAGGAAGAGCGTATTACCAACTTCTAGAATGTCTTGGGGTAATCAGGATTCACTCGCCCATGAGATCTAAGAGGAGGGAAGACTGGTCAGATATACCTCGTAGAGAAATGATAAGGCTGGCACATGCAGCAGCTTTGCACTTGAAAAGGAATGAAGACGGTCATGGAGGTGATTTAGGGCAGTTTGGCAATTGTAAGGTGTGGGGCAATGTGGATCCAGAGAACAGTGGACCTGTCTCAGGATCACCAGACATGAGTGATGTCAGGAAATATTCAAATTATAGTAAATGGGAAGTGATGCCTTTTGAGAGTTTGAGGAGGGAAGCACAGGATCACTATAACCAGATGCAAGGGGTCTCTCTATATAAAATGGACGGCAATAGGTTGGATGATCTAGTCTGTGTGAGACATTCCTTAAAAGCTGAGGCGTAA 1428 0.4503 MRQHKQVSALNRRPSVLYLVCAAALFSLLLFCIQSSLFAGSVSSAHKSEIIRVLSNFQSSVQQCVDKRGLGLTAHIIDHCNLILKYPEGTNSSWYNAQFKHFEPLEYKYDVCEAILLWEQYRNMTTVLTREYLDSRPGGWMDYAPQRIAQLGTKKCTNKTLCEENLNVLLPAKPPFHPRQFRTCAVVGNSGDLLQTTFGKEIDSHDAVIRDNEAPVNEEYAKYVGLKRDFRLVVRGAARNMVPILKGSDTEVLIIKSLTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSKPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRREDWSDIPRREMIRLAHAAALHLKRNEDGHGGDLGQFGNCKVWGNVDPENSGPVSGSPDMSDVRKYSNYSKWEVMPFESLRREAQDHYNQMQGVSLYKMDGNRLDDLVCVRHSLKAEA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03686 475 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 1 473 IPR044782 GO:0008373|GO:0009846|GO:0009860
Vimu6g03686 475 Pfam Glycosyltransferase family 29 (sialyltransferase) 164 240 IPR001675 GO:0006486|GO:0008373
Vimu6g03686 475 Gene3D Glycosyl transferase family 29 275 352 IPR038578 -
Vimu6g03686 475 Gene3D Glycosyl transferase family 29 142 274 IPR038578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03686 Vimu-Chr6 34706267 34709595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03686 68 346 Glycosyltransferase AT1G08660 86.022 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03686 - - vra:106759327 937.947