Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03640 ATGGGCTTGCCCCAGATACCCCGAAATGAATCTGTTGAAAAGGCTGCACTTATGGGGGCAGCTTTAAATAGCTCACCTCAGTTTTCTGATGTGAGCCCCTCTGCTATAAGCAGCATGAACAGTGTATCTGTTAACACAGGTGGGTTGGCTGCATGTACTCGAGGATCTTCTTTTGACGATTTCCCGAAGAATGCCTCATTAGAAACTTCAAATGTTTCAGATAATACGTTTTATAGAGGAGCCATGGAAGTTGCTTCAAATGTCCACAGTTTGAAGATCGGTTCAACGGATAGAAGTACTCCTTTTGCTTCAAAAACTGGACGCAATGTTCACATTCCTGCTTCAAGGGTTGTTGGTTTTGAATCAGGCAGAACTAATACTTCAATAGATGGTTTAGCTGATGTTCCAGCTGTAAATCTTCATTCTTCTGCTTTTACTAATTTTCCAGCCAATGACACTGATTCTGCCAGTTCATTGGTCAGGAAGCGACTTTTATCTCCATTGAGCAGTATGCTCTCCCCAAGTCATTTTAAAGGTGATCCCCTTGACATTGGCCGCAGAAATAATGCGGTAGACTCCCTTGTAAGGAATGATAATGTTAGCAATTCTATTGCACAAGATAATAAGAAGGCAAATATTGGAAGTAAAATCACTACAATGTCTTCTTGGTCCTTGAGAAGTTGCTTTGAGCAAAAAACTGAGCCCCACAGTACAGAATCTTTTTTCCAATCTGATGATCCTTTGAAGGAAAATACAGGACTACTGTCTCATTGTAGTTCACCCACAGCAGGAACTGATCACTTTAGTGAATCGAGTCAGATTAGGCCTCAAAGTGGCATATTATCTGTGTCTCCTAAAAGCGTGAGCTCTCCTCTTTCTATGTCACCACTTGGTCCTAAATTTTCTGAAAGGATAAAAGCTATTGGTGGATGTAGGAAAGTTGTGGAAGAGATAAAGAATTGCAATATAACTGCACGGAGCATAGAAAAATCCCTTGACAATTCTAACTCATGCCTTATGTTAAATCATAAGGATGATGGTTCCGGAGTTGCATGTAAATCTTTTGATGATGTTGAATTCTTATGCAAAGATTTCTGTCCATCTTCTCTGGATGATATTGGGGACATGAGTTGGTCACTATCTCGAGAATCAGGTCCCACCTCTCACTCCATGAGATTTACTAGAAGTTTGAGTGGGCTTTCGGTCAGGAGGTCTTTAGTTGGTTCATTTGAGGAGTCTCTTTTATCTGGACGATTCTTATCTGGAAACTGTAGTAAGAAAATTGATGGTTTTCTTGCTGTGCTAAGCATTACTGGTGGAAGCTTTTCTCCTAAATCACAGAAGCTTCCATTTTCTGTTACTAGCGTGGATGGAGATTGCTATTTGCTATATTATGCATCAATAGATCTTGCAGGAAATTCCCCTTCAAGCAAGTTTGGAGGCCAATTTCTGAAATCAGGGCTCAGAAATGATGATTCACAACTTGTGAAAAGCCGATTGCGTATACCAGTGAAGGGACGGATTCAACTGGTGCTAAGCAATCCAGAAAAGACTCCCCTTCACACTTTCTTTTGCAACTATGATTTGAGTGACATGCCAGTTGGTACCAAAACATTCTTGCGCCAGAAAGTGACCCTTGAATCTTCCGGGTCCATTTCCCCTCAGTTGAAACAGAGATCACCTGGTTTTGGAAGTCGGATTGATAAGGGGATTGCACCAATGCAAAAGAATGATGACATTGCACGTGAAGGAGAAGTGATGCATGGAGATGCAGTTAATGTTGTAAATAAAACGAAATCTACTAATCAGGGAAATGGAAAGGGTTGTAGCTTGTTGAGTTTAATGAACAAAGAGGAGTCTTCAAACCCAAAACTGGTTGGAGTTCCTTCTGCAGCAAAGACTGACTATGAATATATTGCTGATAAATGTGAGAGGAATGAAAGAAAGGACTGTTGGGATAAAACATGTGATGGATCAAGGAAATCACCAAATTCCTGTTCAAAGGTGAAGGACAATTCTAGTAGTGGTGGTCCACTTCGCTATGCACTCCACCTACGCTTTATTTGCCCTTTTCCTAAGAAGACCAATAGATCTGCTCAAAAAAGCAAACATGCTTCTCTTAAAGAAAAATCTGGATTAAACATGGAAGGGGAACGAAGATTCTACTTATGTAATGATTTGAGGGTTGTGTTCCCTCAACGTCATTCAGATGCTGATGAGGGCAAGGTATGTGCATATGTCTTGTGGTTCTGTTACTTGATTGTGTGGAAAAGCAACATGGCTTCAGATTGCTTGTGTGGAAAACTTTCAACTTTTTTTTTTTCTGGTTCATTTTTATGTTACCATTCTTGTGTTTTGTTCTTTGTTATATTTACATTTAGAGCGATTCTTTGCATCGTTGTACTTCTTGGGTGTTATTTTGTTGCTCATTCTTGA 2436 0.4011 MGLPQIPRNESVEKAALMGAALNSSPQFSDVSPSAISSMNSVSVNTGGLAACTRGSSFDDFPKNASLETSNVSDNTFYRGAMEVASNVHSLKIGSTDRSTPFASKTGRNVHIPASRVVGFESGRTNTSIDGLADVPAVNLHSSAFTNFPANDTDSASSLVRKRLLSPLSSMLSPSHFKGDPLDIGRRNNAVDSLVRNDNVSNSIAQDNKKANIGSKITTMSSWSLRSCFEQKTEPHSTESFFQSDDPLKENTGLLSHCSSPTAGTDHFSESSQIRPQSGILSVSPKSVSSPLSMSPLGPKFSERIKAIGGCRKVVEEIKNCNITARSIEKSLDNSNSCLMLNHKDDGSGVACKSFDDVEFLCKDFCPSSLDDIGDMSWSLSRESGPTSHSMRFTRSLSGLSVRRSLVGSFEESLLSGRFLSGNCSKKIDGFLAVLSITGGSFSPKSQKLPFSVTSVDGDCYLLYYASIDLAGNSPSSKFGGQFLKSGLRNDDSQLVKSRLRIPVKGRIQLVLSNPEKTPLHTFFCNYDLSDMPVGTKTFLRQKVTLESSGSISPQLKQRSPGFGSRIDKGIAPMQKNDDIAREGEVMHGDAVNVVNKTKSTNQGNGKGCSLLSLMNKEESSNPKLVGVPSAAKTDYEYIADKCERNERKDCWDKTCDGSRKSPNSCSKVKDNSSSGGPLRYALHLRFICPFPKKTNRSAQKSKHASLKEKSGLNMEGERRFYLCNDLRVVFPQRHSDADEGKVCAYVLWFCYLIVWKSNMASDCLCGKLSTFFFSGSFLCYHSCVLFFVIFTFRAILCIVVLLGCYFVAHS 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03640 811 SMART DUF4210_2 406 465 IPR025261 -
Vimu6g03640 811 MobiDBLite consensus disorder prediction 658 674 - -
Vimu6g03640 811 MobiDBLite consensus disorder prediction 550 570 - -
Vimu6g03640 811 PANTHER GH03947P 10 743 - -
Vimu6g03640 811 Pfam Domain of unknown function (DUF4210) 406 451 IPR025261 -
Vimu6g03640 811 MobiDBLite consensus disorder prediction 253 295 - -
Vimu6g03640 811 MobiDBLite consensus disorder prediction 655 675 - -
Vimu6g03640 811 Pfam Chromosome segregation during meiosis 679 743 IPR033473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03640 Vimu-Chr6 34101157 34107044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03640 - - gmx:100819038 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03640 6 34101157 34107044 Vimu6g03640 6 34101157 34107044 ECH