Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03639 ATGAAGTCCTCGCTCAGCAAGTTGAAGAAAATTGCACTTCACAAGACCGTTTCCAAGGACAAAAGGGACTTTCACCCCACCGTCAAGTTCGACGAACTCGCTCTTGCTGCCAAGGACATGCAAGATATGAGAGATTGCTATGATAGCCTGCTTTCTGCAGCTGCTGCTACACAAAACAGTGCTTACGAATTTGCTGAGTCGCTGCAGGAAATGGGTACTTGTCTTTTGGAGAAAACTGCCTTAAATGATGATGAAGAAAGTGGTAAAGTTTTGGGGATGCTTGGAAGTGTGCAGCTGGAACTTCAGAAGCTTGTTGATAGCTATCGTTCTCACATTGTACTGACAATAACCAATCCATCGGAGTCTCTTCTTAATGAACTAAGAACCGTTGAGGACATGAAGCGACAATGTGATGAGAAAAGAGAGGTTTATGAATACATGATTGCGCAACAAAAAGAGAAAGGAAAGTCAAAGAGTGGCAAAGGTGAAAGTATCACCTTACAGCAGTTGCAGGCAGCTCATGATGACTATGAAGAAGAAGCAACACTTTGTGCCTTTCGATTAAAATCACTCAAGCAAGGCCAGTCACGCAGTCTCCTAACACAAGCAGCACGTCACCATGCTGCTCAGTTAAATTTCTTTCGGAAAGGACTTAAATCACTAGAGGCGGTTGAGCCACAAGTCAGGATGGTTGCTGAACGACAACATATTGGTTACCAATTTAGTGGCCTTGAGGATGACATTGGTGAAGATGGTAATAATGATGACAGTAATGATTTTGATATCATTGAAGGCGGTGAGCTGAGTTTTGACTACAGATCTAGTAAGCAAGGGCCATATATTGTTTCCACATCACCAAACTCAGCAGAGGTGGAAGAACCAGGTCGCTCTTATGTTCGAGCTTCAACCCCAGAAACTGCAGAGACAAGTCTAGACAAGAACCAAGGGGATTTTAAACTTTCAAGTAGAGTCAGCAGTTATTCAGCTCCAATACTTGCAGAAAAGAAATTTGACCCTGCTGAAAAAGTAAGACAACTTATAGCATCATCTGCAGCAAAGTCTAATGCATATGTCCTTCCTACACCAGTTAACATCAAAGAAACCAAAAGTAGCTTAGCCCCCCGCACAAGTGCAAGTGGATCTTTGCATAATTTGTGGCATTCTTCTCCTCTAAATGAAAAAAAGAATGAGAAAGATATTGATAGTAAATTGTCTGAACCGACTATCCATAGAGCTCACTCTGTTCTCAAAGAAAGTAATAGTGATTCTACATCCATCCAGTTACCACGTCCTTCAGCAGATGGACTCTCACTTCCACAAGTTGATGTTTTCAATGCTTCTGATCCTAAGAAAATAAAGATACAAGCCTTTTCTGGTCCATTGACTAATAAACCATTGTCAGTAAAACCTATTTCAGGGGGTTTTCCACGTTTACCTGTACCACAGCCTTCATCTCCAAAAGCATCTCCCAATGCTTCACCTCCCCTTGTTTCTTCACCCAGAATAAGTGAGCTTCATGAACTTCCTAGACCTCCTGGTAGTAAGCCAGTGAAATCTTCTCGAGTGGGTCACTCTGCTCCATTAGTATTTAAAAATCCAGAGGTTACTGTGGCTAATAAATTTTCTTCAGTTATATCCAGTGTAGCATCTCCACTCCCAACACCACCAATAGTCTCTCGGAGTTTTTCTATACCTTCCAGTGGTCAGAGGGCTATGACATTAAATGTTTCTAATGCTAAGTATTTGGATAGTCCCCAAGTTTCAAAGGTTGATAAAGCTCCGTCACCACCACTTACACCCATGTCTCAAAGAGTCTCTAGTATACCTGATATGGCTTCTCACTCCAGTGAAATCCAAGGTAAGAAGATACTAATTGTTGCAGTTCTCATTATTGCAATTTTTAATAAATTTGGATATATTTTTTCTGTCTTCATATAA 1938 0.4118 MKSSLSKLKKIALHKTVSKDKRDFHPTVKFDELALAAKDMQDMRDCYDSLLSAAAATQNSAYEFAESLQEMGTCLLEKTALNDDEESGKVLGMLGSVQLELQKLVDSYRSHIVLTITNPSESLLNELRTVEDMKRQCDEKREVYEYMIAQQKEKGKSKSGKGESITLQQLQAAHDDYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPQVRMVAERQHIGYQFSGLEDDIGEDGNNDDSNDFDIIEGGELSFDYRSSKQGPYIVSTSPNSAEVEEPGRSYVRASTPETAETSLDKNQGDFKLSSRVSSYSAPILAEKKFDPAEKVRQLIASSAAKSNAYVLPTPVNIKETKSSLAPRTSASGSLHNLWHSSPLNEKKNEKDIDSKLSEPTIHRAHSVLKESNSDSTSIQLPRPSADGLSLPQVDVFNASDPKKIKIQAFSGPLTNKPLSVKPISGGFPRLPVPQPSSPKASPNASPPLVSSPRISELHELPRPPGSKPVKSSRVGHSAPLVFKNPEVTVANKFSSVISSVASPLPTPPIVSRSFSIPSSGQRAMTLNVSNAKYLDSPQVSKVDKAPSPPLTPMSQRVSSIPDMASHSSEIQGKKILIVAVLIIAIFNKFGYIFSVFI 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03639 645 MobiDBLite consensus disorder prediction 369 389 - -
Vimu6g03639 645 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 616 IPR037488 -
Vimu6g03639 645 MobiDBLite consensus disorder prediction 586 605 - -
Vimu6g03639 645 MobiDBLite consensus disorder prediction 390 417 - -
Vimu6g03639 645 MobiDBLite consensus disorder prediction 463 499 - -
Vimu6g03639 645 CDD BAR 39 227 - -
Vimu6g03639 645 Gene3D Arfaptin homology (AH) domain/BAR domain 31 237 IPR027267 -
Vimu6g03639 645 MobiDBLite consensus disorder prediction 369 438 - -
Vimu6g03639 645 SUPERFAMILY BAR/IMD domain-like 31 229 IPR027267 -
Vimu6g03639 645 MobiDBLite consensus disorder prediction 476 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03639 Vimu-Chr6 34083745 34090591 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03639 - - gmx:100775799 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03639 6 34083745 34090591 Vimu6g03639 6 34083745 34090591 ECH