Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03624 ATGTTCCTCTGGAAAGACCAGAGGAGTTCTTCCTCATTGGTATCCTTTGGTGTTGTTCTAATAAAGACTCCAAGATTCTGTGGGTTTATTCGTATTAGGTCTGAATACCTATCAGGCATTGCCATTCTTGCTGGCGTTAATATGGGTAGCACATTTAATCCACAGATTTTAGTGGAAAAACTAGCCAAGCTGAATGGTTCACAAGCAAGCATAGAGACCAAACAGGTTGTTGAAACATGGGATAGGCAATTTCATGGTTCTCCACGTGAGAAGAGATTAGCATTTCTGTATCTCGCAAATGATATTTTACAGAACAGCAGGCGAAAAGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTTCGAGACGTGATTCAAAATGGAGATGATTTTGCTAGGAATGCGGCACTTCGACTGATTGTTATATGGGAAGAGAGGAAAGTCTTTGGTTCTCGTGGTCAAATTCTCAAGGAAGAGTTTGTTGGGAGGAATGTGGAAAACACCAGTCGAGATGTGAAGCCTACAAACATGAAGGTGAGGCCATCTGCAGGGAATGCATTGGAGAAAATAGTTTCAGCTTTCCATGTTGTTTATGGAGGGCAAAAAGATGAAGACGCCATATTGAGCAAATGCAGGAATGCCATTAACTGTCTTGATAAAGCAGATAAAGAAATAGTTTCAGGGCAATTCGGTGGATCGGCACTGGTAGATGAGCTCCAGGGGCATAATTCTGTACTGAAGGACTGCATTGAGCAGTTAACGGCCATAGAGTCATCAAGGACTAGTCTTGTGTCTCACTTGAGAGAAGCTCTTGAAGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCAAATGTTCGGTCAGATCGGGCGTCCAACAACTGCCAACAGTTACTTAATGGCAATAACATTCAGTCGTTAGCTGAACAGAGCTCAAAGGAAATTCAAACCTCCATGTCATCTGCAAGTTTTAGTATTATTTCTAGTGAAGGGGAACAATCTGCTCCATTGATGTACACCCCACAAGCGTCATTTTCTCAGAAATCTGGACACATTGAGGAAGATCCACGCAAGTCTGCAGCTGCAGCAGTGGCAGCAAAATTGACCGCTTCAACATCCTCCGCGCAGATGCTATCATATGTGCTGTCCTCCCTAGCATCAGAAGGTGTCATAGGCAATCAGTCAGCAGCCGATTATCACTCGGAGAAGAGGACCAAGCTCGAGAATGACCAACCATCTTTTATGCCATCTCAGAATCCTCAACAACCACTTCCTCCCTTTTCTCTACCTGATTCTATTCAACACAATGCTCCTACAACCAACCAGCAATCTACTCCCAATGAACCACCACCTCCACCCTCATCATCACCTCCTCCATTGCCACCACCGCCACCACCACCAATGTCACAGTACCCAGTGCCACAGTTCATGCAGACTGCTGGATCTATTAGTAGTATGGCATACAGCTATGGAATGACACAACAGCCGACAATGACAGCCTATCCTGGTGTCGGTGCTTCCACTTTTACCCCTCCTCCAATGGGTACATATCAAGGTTTTCAGGGTTCAGATGGAAATTACTATAACCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1653 0.4477 MFLWKDQRSSSSLVSFGVVLIKTPRFCGFIRIRSEYLSGIAILAGVNMGSTFNPQILVEKLAKLNGSQASIETKQVVETWDRQFHGSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDFARNAALRLIVIWEERKVFGSRGQILKEEFVGRNVENTSRDVKPTNMKVRPSAGNALEKIVSAFHVVYGGQKDEDAILSKCRNAINCLDKADKEIVSGQFGGSALVDELQGHNSVLKDCIEQLTAIESSRTSLVSHLREALEDQEFKLGQVRSQIQAANVRSDRASNNCQQLLNGNNIQSLAEQSSKEIQTSMSSASFSIISSEGEQSAPLMYTPQASFSQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNQSAADYHSEKRTKLENDQPSFMPSQNPQQPLPPFSLPDSIQHNAPTTNQQSTPNEPPPPPSSSPPPLPPPPPPPMSQYPVPQFMQTAGSISSMAYSYGMTQQPTMTAYPGVGASTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03624 550 ProSiteProfiles CID domain profile. 28 169 IPR006569 -
Vimu6g03624 550 CDD CID_RPRD_like 54 163 - -
Vimu6g03624 550 SMART 558neu5 56 165 IPR006569 -
Vimu6g03624 550 MobiDBLite consensus disorder prediction 452 480 - -
Vimu6g03624 550 MobiDBLite consensus disorder prediction 404 485 - -
Vimu6g03624 550 Gene3D - 49 164 IPR008942 -
Vimu6g03624 550 MobiDBLite consensus disorder prediction 512 550 - -
Vimu6g03624 550 MobiDBLite consensus disorder prediction 436 451 - -
Vimu6g03624 550 MobiDBLite consensus disorder prediction 519 550 - -
Vimu6g03624 550 Pfam CID domain 56 155 IPR006569 -
Vimu6g03624 550 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 48 530 - -
Vimu6g03624 550 SUPERFAMILY ENTH/VHS domain 71 152 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03624 Vimu-Chr6 33922524 33932573 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03624 K15559 - gmx:100806108 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03624 6 33922524 33932573 Vimu6g03624 6 33922524 33932573 ECH