Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03621 ATGCCGGAGGAAGAAGTAGTTGAGCTCAAGTTCCGTCTCTACGATGGATCCGATATGGGACCCTTCCGTTACTCCCCTGCTTCCACCGTATCCATGCTCAAGGACCGGATTTTTGCAGAAATTCTGGAGAACAACAGAACGGTTGGCCAGTGTAGAGTACCTTTAGGCGAGCTTCCCAAAGGGGTTATTATCACCATGCATGTTGTGGTGCAGCCACCTTTGCTTAAAGCAAAAACAGTTACTGTTTTCTACAATCATACATATATACCTCAAAGAGCAGTTCCATATAGGTACAAGGAGGATCCTTCGTCATACTGGCACGGTACCTTGGGACAAGTCCTGCCTGTTGTCCCTGCAGTGCGTGCACCATTTACTCAAGGGCACGAGCAATATCCTCAATGGTATTGTTAA 411 0.472 MPEEEVVELKFRLYDGSDMGPFRYSPASTVSMLKDRIFAEILENNRTVGQCRVPLGELPKGVIITMHVVVQPPLLKAKTVTVFYNHTYIPQRAVPYRYKEDPSSYWHGTLGQVLPVVPAVRAPFTQGHEQYPQWYC 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03621 136 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 39 IPR039540 -
Vimu6g03621 136 Pfam Ubiquitin-2 like Rad60 SUMO-like 41 78 IPR039540 -
Vimu6g03621 136 Gene3D - 41 79 - -
Vimu6g03621 136 Gene3D - 1 40 - -
Vimu6g03621 136 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 40 IPR040015 -
Vimu6g03621 136 SUPERFAMILY Ubiquitin-like 2 75 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03621 Vimu-Chr6 33861683 33870078 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03621 - - gmx:100306698 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03621 6 33861683 33870078 Vimu6g03621 6 33861683 33870078 ECH