Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03584 ATGCCTTCAATTCCAGAAGAGCCTCTCTTGGCCCCTAACCCTGATCGATTCTGCATGTTCCCTATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCAGAAGCCTCCTTCTGGACGGCGGAGGAGGTCGACCTCTCGCAGGACATCAGTCACTGGAACACTCTTACCGACGGCGAGCGCCATTTCGTCACCCATGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTCGAAAACCTTGCCGGCCGTTTTATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTTTTACGGCTTCCAGATCGCTATCGAGAACATTCACTCCGAGATGTACAGCCTCCTTCTCGAAACCTACATTAAAGACTCCGTAGAGAAAAGCCGTCTCTTTCACGCCATTGACACCATTCCCTGCGTCACCAAGAAGGCCAACTGGGCCCTCCGCTGGATCGACTCCTCCGAGTCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGTGTTGAGGGAATCTTCTTCTCCGGAAGCTTTTGCTCCATCTTTTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAACGAACTCATCTCCCGCGACGAGGGTCTCCACTGCGACTTCGCTTGTCTGCTCTACTCTATCATGCGGACAAAGCTCCCTGAGGAGCGCGTGAGGGAGATCGTGCGCGATGCTGTGGACATCGAGAGGGAGTTCGTATGCGACGCGCTTCCTTGCGCGTTGGTGGGGATGAACGGGGCCTTGATGAGTCAGTACATTGAGTTTGTTGCTGATAGGTTGCTCGGTGCGCTTGGGTGCGGGAAGGTGTACAATGTGCAGAACCCATTCGATTGGATGGAGCTGATTTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTGGGGGAGTACCAGAAGGCTTCAGTTATGTCCAGCTTGAACGGTAACGGTGATGCCCACGTCTTCAAGATGGATGAAGACTTTTAG 990 0.5525 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDISHWNTLTDGERHFVTHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSVEKSRLFHAIDTIPCVTKKANWALRWIDSSESFAERLVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSIMRTKLPEERVREIVRDAVDIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGDAHVFKMDEDF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03584 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 7 329 IPR000358 GO:0009263
Vimu6g03584 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Vimu6g03584 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Vimu6g03584 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Vimu6g03584 329 SUPERFAMILY Ferritin-like 4 307 IPR009078 -
Vimu6g03584 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03584 Vimu-Chr6 33192132 33193382 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03584 K10808 - gmx:100790224 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03584 6 33192132 33193382 Vimu6g03584 6 33192132 33193382 ECH