Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03580 ATGGAAAACATGCAGAGCTTCTGGCAATTGGGTGATGAACTTCGCGGACACTCAAAAGCGTCAGAAGATCACAAGTGGTTAATGGTTGCTTCTAAGTTGGCTGAACAGACAAGATTGAAGGGGGAGCGTGTGAATAACCTTGACCTTTCAAAGGGCCCCATTGAAACAAGGTCTAGGGATAAATTTGGGTTCCAGGAAGAGAATAAATTTGATTCTCTCAACTTGAGCATGTTGAACCTGGACTCTAAATTTACTGAAAATGTGAGCAAAAGCTCACTTCGAAATAGTGTTTACAGTATGAATGCAGTGTATCAGAAAAACAATGCAAACTTGGTGAGTAATGTGAACAGTAACAAGTATAGTGGTAATATTCAGCATAACAAAGAGTCCAACAATAACAGTGGCAACAGCAACAACAATGAGAGTAACAACTCAAATGCAACTGACAAAAGGTTTAAGACCTTGCCTGCAGCCGAGACACTCCCACGCAATGAGGTGCTTGGAGGATACATATTTGTCTGTAACAATGACACAATGCAGGAAGACTTGAAACGTCAGCTATTTGGCTTGCCTCCAAGGTATAGAGATTCTGTTCGGGCAATAACACCAGGATTACCTCTATTTCTGTATAACTATACTACTCATCAGCTGCATGGCATTTTTGAGGCAGCAAGTTTTGGTGGCTCTAACATAGATCCAACTGCCTGGGAGGATAAAAAATGCAAAGGCGAATCAAGGTTTCCAGCTCAGGTAAGAATCCGTGTTAGGAAACTCTGCAAGGCATTGGAAGAAGATTCGTTCAGGCCAGTATTGCATCATTATGATGGTCCAAAGTTTCGTCTTGAGCTGTCAGTTCCAGAGACTCTGGATCTGTTGGACTTATGTGAGCAAGCTGGTTCGGCAGCATAA 909 0.4224 MENMQSFWQLGDELRGHSKASEDHKWLMVASKLAEQTRLKGERVNNLDLSKGPIETRSRDKFGFQEENKFDSLNLSMLNLDSKFTENVSKSSLRNSVYSMNAVYQKNNANLVSNVNSNKYSGNIQHNKESNNNSGNSNNNESNNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSAA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03580 302 PANTHER - 138 299 IPR044832 GO:0034976
Vimu6g03580 302 Pfam Development and cell death domain 168 294 IPR013989 -
Vimu6g03580 302 SMART dcd 165 297 IPR013989 -
Vimu6g03580 302 MobiDBLite consensus disorder prediction 114 148 - -
Vimu6g03580 302 ProSiteProfiles DCD domain profile. 165 297 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03580 Vimu-Chr6 33107858 33109766 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03580 - - gmx:100789162 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03580 6 33107858 33109766 Vimu6g03580 6 33107858 33109766 ECH