Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03578 ATGAGAAGCAACCAGAACCACAACCGGCCACGAACCAAAAACCGGTCACTGCATTGCTCGCTCCTCAAGCTCAACCTCTCGCGCGAGAGAGACCCTACTATCACCGTCAATAACTTCACCGGCGACGACAAACATCACCGGGACTGCGTCTGGCCGCAATATCGTGACCTTGCTCCAAGCTCGTCTTCGCAAGCGAGAACGAAACGTCTACGGGAGGTTAAATTGCAGAGAATACAGAAGAGCAACAAATGTTTCAGAGTGTTACATGACCAAGTTGACTCCATGACCAGTTTCAACCGTGAAGATAGGGTTGAAAAGCTAAATGTGAGTGAGTGTAAAACGAATTGGACCGAGAAAGAGGAAGCGTTTCGTCGGCCCTCAAGATTACCATATCGGTATAGGTGTGATGGGAATGAGGGGTTGGGTTGTGAAGAAATTGCGACTCAACCTGACGTCGTGGCCGACGGCGACTATGGCGGTGATGCCGGCACAAGGCGTGGAGGGAGAGGGAGGAGAGATAGAAGGCTTCTGGATAGGAAGCTGAAGGCGTCAGTGAATCGACCTCCCACGCCAGATGTGGTCGAAAATACCCCTGAAAGGGAACCCACGCTTCAAGAGCTCATCAATATAAAGTTGATTGAGACTGGCGAGAAGGAGCGCCTCATGGAGCTTTTGAGGGAAAGACTTGTTGACTGTGGTTGGAAGGATGAAATGAAAGCTCTTTGCAGTTTATTATACTTTCATGCTATCGGTTTCTCTTATTCCACTACACTAAAGAGTGTCCTGGTTCATGCTACTGTAAATGCCGCTGGAAATGAGCTTTTGCACCCTGTGGGGATTGAACATGTTTTCCCACAATGTGTGAGAACAAGAGCCGTTGTGAAGAAGAAAGGGAGGAATAATGTTACTGTGGATGAACTTGTACATGTCATTACTCCAAAGGGCCGAGCCTCCGTTCCTGATACCATAAAGGCCGAGTTGTTGCAGAGGATTCGCACTTTTCTTGTGTCTGCTGCTCTCTAA 1023 0.4868 MRSNQNHNRPRTKNRSLHCSLLKLNLSRERDPTITVNNFTGDDKHHRDCVWPQYRDLAPSSSSQARTKRLREVKLQRIQKSNKCFRVLHDQVDSMTSFNREDRVEKLNVSECKTNWTEKEEAFRRPSRLPYRYRCDGNEGLGCEEIATQPDVVADGDYGGDAGTRRGGRGRRDRRLLDRKLKASVNRPPTPDVVENTPEREPTLQELINIKLIETGEKERLMELLRERLVDCGWKDEMKALCSLLYFHAIGFSYSTTLKSVLVHATVNAAGNELLHPVGIEHVFPQCVRTRAVVKKKGRNNVTVDELVHVITPKGRASVPDTIKAELLQRIRTFLVSAAL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03578 340 PANTHER ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR 182 339 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Vimu6g03578 340 Gene3D - 287 339 IPR038212 -
Vimu6g03578 340 Gene3D - 193 248 IPR038212 -
Vimu6g03578 340 Pfam Transcription factor e(y)2 290 335 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Vimu6g03578 340 Pfam Transcription factor e(y)2 207 243 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Vimu6g03578 340 Hamap Transcription and mRNA export factor <gene_name> [SUS1]. 203 338 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03578 K11368 - gmx:100527713 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03578 6 33087578 33092867 Vimu6g03578 6 33087578 33092867 ECH