Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03576 ATGGCTTCCACGCCTTTCTCCACTCTCTGCCACTTCCACAAACCCTCCCTCCGCTTCCTAGCGTTGGACAGGTCCAGTTTCTGCGGCGCGTCGGCGATCTCGTTTCCAAAGGTTCGGAAGAACCGCAAAATGGGAACTTTACCCGTTTCCAGAATTAGTTCTGCTGTCGCCTTCCGAGACCTCGACGCTGACGATTTTCGACACCCGCTTGATCAACAGAATACGCTGATACTGAGAGCGATTCCAGGATTAAACGAACTTGGAAAGGCTCTTCTAGGCACTGTAGCTGAGCAGGTTATGCTCCTTGAGAACATCGGAACATCTGTCCTTGTTTCTAAAAGTCAGCTTCCTGATCTTTACCACCTAATGGTCGAAGCTGCAGAAATATTAAATGTTGATGCCCCTGATCTATATGTTCGTCAAAGTCCTGTACCAAATGCGTATACTTTAGCTATAAGTGGTAAACGACCTTTTGTTGTCATTCATACTAGCCTTGTGGAGCTCCTTACAAAAGCAGAGTTGCAGGCTGTTTTGGCTCATGAGCTAGGTCATCTAAAATGTGATCACGGTGTGTGGCTTACTTACGCAAATATTCTAACCCTTGGAGCCTATACTGTACCTGTGCCATCTGTTGTAGGCATTGGTGGTATGATAGCTCGAACTTTAGAAGAGCAGCTATTCCGCTGGCTTCGAGCTGCTGAGCTGACATGTGATCGAGCAGCCCTTCTAGTTGCTCAAGACCCTAAGGTCGTCATCTCTGTCCTCATGAAATTAGCCGGGGGATGTCCATCCATGGCTGATCAACTAAATGTGGATGCATTCCTGGAGCAAGCTCGCTCTTATGAAAAAGCTGCTTCCAGCCCAATTGGATGGTATATAAGGAATGCACAAACAAGGCAACTCTCACATCCCCTGCCTGTTCTACGTGCTAGTGAAATTGATGAATGGTCAAGAACTCCAGCTTATAAATCCATTTTGAAACGTGGAATTCAGATCAAAACAAAAGAACAAAGTGTCCAGTAG 1023 0.4643 MASTPFSTLCHFHKPSLRFLALDRSSFCGASAISFPKVRKNRKMGTLPVSRISSAVAFRDLDADDFRHPLDQQNTLILRAIPGLNELGKALLGTVAEQVMLLENIGTSVLVSKSQLPDLYHLMVEAAEILNVDAPDLYVRQSPVPNAYTLAISGKRPFVVIHTSLVELLTKAELQAVLAHELGHLKCDHGVWLTYANILTLGAYTVPVPSVVGIGGMIARTLEEQLFRWLRAAELTCDRAALLVAQDPKVVISVLMKLAGGCPSMADQLNVDAFLEQARSYEKAASSPIGWYIRNAQTRQLSHPLPVLRASEIDEWSRTPAYKSILKRGIQIKTKEQSVQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03576 340 CDD M48_Ste24p_like 105 315 - -
Vimu6g03576 340 Gene3D Metalloproteases ("zincins"), catalytic domain 110 197 - -
Vimu6g03576 340 FunFam Peptidase M48 family protein 109 197 - -
Vimu6g03576 340 PANTHER CAAX PRENYL PROTEASE 1 93 318 - -
Vimu6g03576 340 Pfam Peptidase family M48 121 316 IPR001915 GO:0004222|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03576 - - vun:114176376 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03576 6 33067606 33071274 Vimu6g03576 6 33067606 33071274 ECH