Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03565 ATGACCCTCCGTCTCGTGTCAGCACCGCCATCATTCTCTCTCTTCACCTGCCGCTCCTCCGCCTCCACCGCCCTCCCTCCGGCTACGCCGACACCAACGCCAGTGCCAGCTTCTTCAATTCCACCGTCTCCGCCGTTAACGTGCGCACTTCACTGCCCGCACTTCCAATCGTACGCTCCTCTGTGTTCGGGGTGCACGCACGAGTTCAACCTCCACCGTCCGGTCATATTGGACGATGCCAACGATTTCTTTCGGAAACACGGTGTCTCCGACTTCACATTTGACACGTGTAAACTGTGGGGTTGGAGGTGCCGTGCGAAATTGGCCGTGCGTGGCTCTTCAACGGAGCCTCTGATCGGGCTCTATGAGGAGGGTACTCATAACATAGTTGACATTCCACAATGCAAAGCTCATCATCCTAATATTAATGCTGCTGTGGAGCTGCTTCGACGGGGTATTACTGAAGTAGGCATTGGACCATACATTGAAGATGAAGGTATCGGTGATTTGCGATATGTCCAGATGGCGGTGACGACTTATAATACATCTCTTCCTGTGGCTGAAAGATATATGAACGGAAAGGTTCAGATTACATTGGTTTGGAATTCTAGAAATGAAAATTCACCTGGTGCTGACAAACTGAATGCATTGGCAAATTTTCTATGGAAAAATGGTGGGCCACGGAGCAGGGTTCATTTAATTCACTCTGTGTGGGCCAACTTTCAGACTTCTACTAACAATATAATTTTTGGGAATAGATGGAGACATCTTCTTGGAGAAAGAGATTTTTGGGAACATGTTGGTGGAATTGATGTGTCCTTGGCACCTTCTAGTTTTGGCCAGGCAAACACACGGGCATTTGATATCTTGCTGCGGAAGTTACAGAAATATGTTCCATATGAATCAGCTGTTGCTGATTTGTATGCTGGAGCTGGGGTTATTGGATCTGTAAAATGCATTGAGATAAACAAAGAGTCGAAGGCATCTTTTGAGAAGACCATTGAACGTTTACCTTCCACTGTTGACAGCAGTATTACTTGGCATCATGCAGATGCTTCAAAGGAGCCTTTTTTGTGGCTTGTGGGATCAGATGTTGTTGTCATTGATCCTCCTAGAAAAGGACTAGATGCATCTCTTATTGATGCATTGAAAAACATATCATCAATCGAGCGGAAAGCCTTGTCATCTTCTGAAAGCTCAAACTCATCCCAGGAAGAGAAAAGACCATGGGTTTTACGTGCTAAAGAAGCTTCAGTCCAGATTGGAAGCAAACCACTACCGGCTAACATCCCTCAATCAGTGCCACAAACCCTTATTTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCTAGCAAGGCATGGTATTTGGAAAAAGCTCATGGATTTAATTTCTTTCCTGGTACCCAGAGTAAGTGTAGGGTTCCCTTGGTATGGGAGGTTGATATTCAGTACTCAGCATCCCTACCCAATTCTTTACAATCTCCTCCCTTGTCCTGGGAAGGGTGGTACTGGGCCAGCAAAACGCAAAATCCAGCTCCTATAGTGGACTCTTAA 1575 0.459 MTLRLVSAPPSFSLFTCRSSASTALPPATPTPTPVPASSIPPSPPLTCALHCPHFQSYAPLCSGCTHEFNLHRPVILDDANDFFRKHGVSDFTFDTCKLWGWRCRAKLAVRGSSTEPLIGLYEEGTHNIVDIPQCKAHHPNINAAVELLRRGITEVGIGPYIEDEGIGDLRYVQMAVTTYNTSLPVAERYMNGKVQITLVWNSRNENSPGADKLNALANFLWKNGGPRSRVHLIHSVWANFQTSTNNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDILLRKLQKYVPYESAVADLYAGAGVIGSVKCIEINKESKASFEKTIERLPSTVDSSITWHHADASKEPFLWLVGSDVVVIDPPRKGLDASLIDALKNISSIERKALSSSESSNSSQEEKRPWVLRAKEASVQIGSKPLPANIPQSVPQTLIYISCGWESFKEDCKSLLSSKAWYLEKAHGFNFFPGTQSKCRVPLVWEVDIQYSASLPNSLQSPPLSWEGWYWASKTQNPAPIVDS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03565 524 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 1 487 IPR010280 GO:0006396|GO:0008173
Vimu6g03565 524 Gene3D - 103 279 - -
Vimu6g03565 524 PANTHER BNAA06G32370D PROTEIN 38 477 - -
Vimu6g03565 524 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 454 IPR029063 -
Vimu6g03565 524 Gene3D Vaccinia Virus protein VP39 280 421 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03565 - - gmx:100816889 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03565 6 32914863 32925677 Vimu6g03565 6 32914863 32925677 ECH