Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03562 ATGGAAAAGATGACTCATTTTTTGACTCAAAGGCCTGAATTTACTCCATCTCGTGGCAGCACTCCATTGCACCACATTTTTCTCAACAAAGCTCCTTCTTCTGAGCCTGAACCATCTCCAACAACACAAAAGAAAAAGTTGTTGGATCTTTTCCGCGAAAGTGTGAGAGAAAACCCAAGTGAAGATGGTGAGAAAACTTTTGACAGTGAAATGAAAGAAGTGAAAGCAACAAGTGTGCATGAACTTCCGAAATCTGCACACAGCACTCCATATGTTTCATGGGGGAACTCTGCATGTAGCAGTGAAAGAACTACGAATGGAGATCATGTATCCCTCAGAGAAAAAACTGTTAAATCTGTTCAGGGGTGCCTTCCGAGCTTGACTTCATGCCGTAGCTTCAGTGAGAGGAAGAGAAAGACAAGTCCTGCAATAGCAGCAAATGGAAAAGCTTAG 453 0.426 MEKMTHFLTQRPEFTPSRGSTPLHHIFLNKAPSSEPEPSPTTQKKKLLDLFRESVRENPSEDGEKTFDSEMKEVKATSVHELPKSAHSTPYVSWGNSACSSERTTNGDHVSLREKTVKSVQGCLPSLTSCRSFSERKRKTSPAIAANGKA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03562 150 PANTHER OS01G0920100 PROTEIN 11 141 IPR038947 -
Vimu6g03562 150 MobiDBLite consensus disorder prediction 1 44 - -
Vimu6g03562 150 MobiDBLite consensus disorder prediction 75 108 - -
Vimu6g03562 150 MobiDBLite consensus disorder prediction 89 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03562 Vimu-Chr6 32887591 32888353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03562 - - pvu:PHAVU_001G0953001 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03562 6 32887591 32888353 Vimu6g03562 6 32887591 32888353 ECH
Vimu6g03562 6 32887591 32888353 Vimu8g00568 8 12105758 12108550 PCT