Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03552 ATGAGGGTTTTGAGTAATGAGAATTGGAAGCAAGGGGTGTTGACTATTTTGGACATTTGGGAGCTTGTTAGGAGGCTTATTGTGACTTGTCTATGCTATCAAATGAGGAAAATCTGGTGTAGAACTATTAAGGGCCTCTTAGGGGTTCTGGATGTCTATTTTGGACGTTCTTTAGGTTGTTTTAAGGGTTTTGGACCCTTTCGGAGCTCTCTCACAATCTCACATCTACCAAACACCAAGCTCGGCCGGCGCATCGTGAAAAAGAGTATGAGTTCCTCTGCAACAGACGATAACCCAACAGGATCCGTAAAAAGAGTTGCTGTTATTGGTGCTGGGGTAAGTGGGCTTGCTGCCGCTTACAAACTGAAATCACATGGTGTGGATGTCACTGTATTTGAAGCTGAAGGAAGAGCTGGAGGGAGGTTGAGAAGTGTTTCTCGGGATGGTCTTATTTGGGATGAGGGAGCTAATACAATGGTAAGTTTATCATGGATGTGCTATTTTAAAGAGATCTTCACATTTGAGGAGGAGAATTTGTAA 540 0.4333 MRVLSNENWKQGVLTILDIWELVRRLIVTCLCYQMRKIWCRTIKGLLGVLDVYFGRSLGCFKGFGPFRSSLTISHLPNTKLGRRIVKKSMSSSATDDNPTGSVKRVAVIGAGVSGLAAAYKLKSHGVDVTVFEAEGRAGGRLRSVSRDGLIWDEGANTMVSLSWMCYFKEIFTFEEENL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03552 179 Gene3D - 90 178 IPR036188 -
Vimu6g03552 179 PRINTS Adrenodoxin reductase family signature 105 127 - -
Vimu6g03552 179 PRINTS Adrenodoxin reductase family signature 128 141 - -
Vimu6g03552 179 SUPERFAMILY FAD/NAD(P)-binding domain 104 161 IPR036188 -
Vimu6g03552 179 PANTHER PROTOPORPHYRINOGEN OXIDASE 99 160 - -
Vimu6g03552 179 Pfam Flavin containing amine oxidoreductase 113 160 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03552 Vimu-Chr6 32762677 32765077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03552 105 155 Acyl Lipid Metabolism Gene Families AT3G23530 46.154 1.77e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03552 K00231 - pvu:PHAVU_001G095900g 129.028