Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03467 ATGGCTTACGATTCTTCCCCTCATGGCGGTGTGCATCAGTTTGTGTTAGAGGGCACAGAATCAAAGCCTTTGGACACGGAATCAGCAGAACCGGTGACCCTTTTGATTAAGCACCTACCAGAAGCCATTCCTCATGACACCCTTTCTCGAATCTTCGCAAATTTCGGTGCTTTCTCGGTGCGCCCTTGCTCTAGTGCCAGGTATCTAACTGCCCAAGGTTTCGATTTTCCCACTGTTTTTCTTTCGTTACAATTTGAAGGTCTTGAGTGTTTGAATATGACTCTGGAAACTATAAATTTACATTTAACTCTTAACAATCTTTTGCATGTTTCTTTAATTACCAAGATTCTGTTTAGTGTAAGCAAGTTTGCACAAGATAATAATATTTATTTTGAATTCTTTTCTCACTATTGGTTTGCAAAATCTCAGGAATCCAATGGCCTTCTTCATGGACTTCTTGGTTCTGATGGCCTGTTTCAGTTTTCAAGTTTCCCTTTTACGCCTAGACATGTTTCTGTTTGTTCTAATAAGTTGAAAAATTGTGCTTTTGCAGATTTCAAAAATGAGATGGTGGCATCTCAAGCACAACGTCAACTACATGGGTTGAGATTTCTTGGCAAAGTCTTGTCAGCAGAGAGAGCGAGTAAGCTAACTGGTAATGGTGAAAATAGTAGCGGTGATCAGTTGGGTAAGGACTCTAAAACATCAATGCTGAAGAATGCAAATGTAGGCAAACCTGTTGATGGAGATACAAAATCAAGAGGCCTCCCTATTCCTGAGCCAATTGCTGATAGACTTGGTGTCAATTATCCTTTTCCTCCTCATCTTGAGTATGCTTCTTATTTTAAGTTCTTGTTAGTATTTGTTGCTATTGCAAAAAGGGATGCCAGGTATGCTTACCCTCCACCTGATGGAAATATATTAACGAATATTGTGAATGCTCTAATTGCTGTTCCGCGCTTTTACACTCAGGTTCTACACTTGATGAACAAAATGAACATCCCTGCTCCATTTCGTATGGCACTGCCCACACCTCCATTACCTCCAGAGGTACCAGCACCACCTCCTCCTACTGTAACTATTAATCCTCAGTCTGCATATCTGTCCAGTGATGAATCAGAGATGGAATCGTCCGATGAGGAGTGTGACGCAAGCACAAAAAAGTCTGGACAAAAGCGTGCTAGGCATGAGGCCATTGTTGGCCCTGCTATTGATAAAGGTGTGGCTCATGAGTCTGTTGGAGTAAAATCAGCCACCTTGGTCCCAAAAGAAATCCCTGTGATAAAAAAGAACCATGTGTTAAAGATAAACATTGTCCCCAAAGCAACACTAAATAAACATAGAGATGATGAGACAACACAAGAGTTGCAAGAGCCAGAAAAAGATGTTCCTGATCCTAGCAAATTTTTGACTCCAGATGAATTAGAGAAAGGAAAGTTGCCTCCTGAGGAAATCTTATCCCTTCCAATGTTTAAGAACTATACAGCTGGAAATCCTGCTCCTGTGTTGTATGTTAAGAATTTGGCAAAAGATGTGATTGTTGATGATTTCTATTATATATTTGGTAAGCTATCAAGACTTATAGTGGATACAGGGTCCTTATTTGGAAGTGTTGAGGCTGCTAAGTCTGGTCTTCAAGTCAAACTAATGCAGGAAGGACGAATGAGGGGTCAGGCGTTTCTGACATTCCCCTCTGTTGAATTGGCTCATCTGGCTCTGATGACTAATGATGCATTCTTAATTCACTCATGGGGAGAGGACCCTGCACTAACCACTGAGACTACAACACTCAGCAATGACAGTGATATGAATGCTAGCACGTATATTCTCCTTGGGCTTATGGATGCTATGTGA 1854 0.411 MAYDSSPHGGVHQFVLEGTESKPLDTESAEPVTLLIKHLPEAIPHDTLSRIFANFGAFSVRPCSSARYLTAQGFDFPTVFLSLQFEGLECLNMTLETINLHLTLNNLLHVSLITKILFSVSKFAQDNNIYFEFFSHYWFAKSQESNGLLHGLLGSDGLFQFSSFPFTPRHVSVCSNKLKNCAFADFKNEMVASQAQRQLHGLRFLGKVLSAERASKLTGNGENSSGDQLGKDSKTSMLKNANVGKPVDGDTKSRGLPIPEPIADRLGVNYPFPPHLEYASYFKFLLVFVAIAKRDARYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEVPAPPPPTVTINPQSAYLSSDESEMESSDEECDASTKKSGQKRARHEAIVGPAIDKGVAHESVGVKSATLVPKEIPVIKKNHVLKINIVPKATLNKHRDDETTQELQEPEKDVPDPSKFLTPDELEKGKLPPEEILSLPMFKNYTAGNPAPVLYVKNLAKDVIVDDFYYIFGKLSRLIVDTGSLFGSVEAAKSGLQVKLMQEGRMRGQAFLTFPSVELAHLALMTNDAFLIHSWGEDPALTTETTTLSNDSDMNASTYILLGLMDAM 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03467 617 MobiDBLite consensus disorder prediction 347 361 - -
Vimu6g03467 617 Gene3D - 16 231 IPR012677 -
Vimu6g03467 617 MobiDBLite consensus disorder prediction 347 395 - -
Vimu6g03467 617 SUPERFAMILY RNA-binding domain, RBD 175 581 IPR035979 GO:0003676
Vimu6g03467 617 MobiDBLite consensus disorder prediction 445 475 - -
Vimu6g03467 617 Gene3D - 496 583 IPR012677 -
Vimu6g03467 617 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 501 597 IPR000504 GO:0003723
Vimu6g03467 617 MobiDBLite consensus disorder prediction 216 240 - -
Vimu6g03467 617 MobiDBLite consensus disorder prediction 216 256 - -
Vimu6g03467 617 PANTHER UNCHARACTERIZED 169 279 IPR045164 -
Vimu6g03467 617 MobiDBLite consensus disorder prediction 380 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03467 Vimu-Chr6 31486584 31492959 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03467 K13157 - gmx:100818499 603.979