Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03464 ATGGCTCAAGTTTTGACCAAGGCCAGCCTGGTTTCTTCGTGGCATGCTAGTAGTCAACGCCACCATCGAAGAGTATCCATGCTTCCTTGTAGCTTCGTTTCTGACATTGGAAGGTTCCCTTCTCTCAAGTTAAAGTCTCAGATTCTCAGATCTTGGTCCTCTTCTTCAGAGTTTCAGGGTAAAAAGCTTTTCTTTCACGTAAATAGAGCGATACCCAACCGGGTCAGTTCGCGGTTGAGAACTTCGACTGCAACTCAGATGACCCATAGAATAGGTAAAGTTCAGAAATGGTGGGAAAAGGGGCTTCAGCCCAACATGAAAGAGGTGACTTCCGCCCAAGATCTTGTAGAATCATTGCTAAGCGCAGGGGACAAGTTGGTGGTGGTTGATTTCTTCTCTCCTGGTTGTGGTGGCTGCAGAGCCCTTCACCCTAAGATATGTCAACTGGCAGAGATGAATCCTGATGTTCAATTCCTTCAGGTAAACTATGAGGAGCAGAAGTCCATGTGTTATAGCCTCAATGTCCATGTTCTTCCCTTCTTCCGCTTCTATAGAGGTGCTCAAGGTCGATTATGTAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAAAGATGCATTGGCCAAACACTCTTCAGATAGATGTAGCTTGGGCCCAACCAAAGGGTTAGAGGAGAAAGAGCTCTTTGCTCTTGCTGCCAACAAAGATCTTTCGTTCACCTTCTCACCAAATCCCTTACAACCTGAACATGCAGATGAAGACTTGGCTACTGCTTCCACTCCTGTTCTTAGTTCAGAATCTCTTCATTCATTGACTCTCATTTCTGAGGTCTCCAGAGAGAAAACCTTAGCCACTGCTGGGAGATGA 870 0.4586 MAQVLTKASLVSSWHASSQRHHRRVSMLPCSFVSDIGRFPSLKLKSQILRSWSSSSEFQGKKLFFHVNRAIPNRVSSRLRTSTATQMTHRIGKVQKWWEKGLQPNMKEVTSAQDLVESLLSAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVQFLQVNYEEQKSMCYSLNVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHSSDRCSLGPTKGLEEKELFALAANKDLSFTFSPNPLQPEHADEDLATASTPVLSSESLHSLTLISEVSREKTLATAGR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03464 289 Pfam Thioredoxin 117 188 IPR013766 -
Vimu6g03464 289 ProSiteProfiles Thioredoxin domain profile. 73 213 IPR013766 -
Vimu6g03464 289 Gene3D Glutaredoxin 99 218 - -
Vimu6g03464 289 PANTHER THIOREDOXIN, MITOCHONDRIAL 68 242 - -
Vimu6g03464 289 FunFam Thioredoxin-like 1-2, chloroplastic 95 213 - -
Vimu6g03464 289 CDD TRX_family 122 188 - -
Vimu6g03464 289 SUPERFAMILY Thioredoxin-like 93 211 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03464 Vimu-Chr6 31429315 31430939 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03464 - - var:108327816 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03464 6 31429315 31430939 Vimu6g03464 6 31429315 31430939 ECH