Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03460 ATGGCACAGTTCACTACGCAGGGTCGGCTCAAGTTGTTCTTCAATGGGGAGGGCGTGTCTTCTATTTTGGATCAGAAGGACCCTTTTCTCTACAAGTGCAGATCAGTTCAGACCAGCGAGCGAAAAACACGGTGCATAGGTTCTTCTGCTAGGATTTATTATGCTTCAACATCATCTCTGTGTAACAAAAACAACCGTTGTAATGCGGGGGCAAGCTCCACTGCTGGCAATGGGAGTGTTCATCATGAGGATGATGATGAAGATGAGGACGATGATTTTGATGAGGACAATGATGTGTTTGACGGAGATGGCTTGTCTTGTTTCCGTGGTTTGGTTTTGGACATAGCTTACAGCTGGTTTGATAGTAAGGTTTTGGTAGTTGTTGTATCTCTAGGAATACTGCGTGACTTGGCCAGTAAATGTCGTAGGCTGGAAACGTGCTATATGTTTGGAGTTTATGGAGAAGGCCTGGTGGCTGATGTACTGGAGTATTATGCTAAGACAGTGAACTCCCCCAGTGGATCTTTCTATATACCAGCTGTCTTAAGGGTTCCTCATTTACTTCAGGTTGTTAAAAGAAGAATAATCAAGAACAATCTTAGTCGAAAAAATATACTATTTCGGGACAATTACACCTGTCAGTATTGCTCTTCACGTGATAATTTGACCATTGATCATGTTGTGCCCGCTGCGTTAGGTGGAGAATGGACATGGGAAAATCTAGTGACTGCTTGTGCCAAATGCAACTCCAAAAAGGGTAAAAAAACTTTGGAGGAGGCAAAAATGAAGTTGATTAAGGTCCCAAAGGCTCCAAAGGACTATGACATTCTTGCCATACCTCTAACTGCTGCGGCCCTGAGAATGCTGACAGTAAGAAAGGGAACACCTGAAGAATGGCGTCAGTATCTTAGGTCTCCTTGA 921 0.4365 MAQFTTQGRLKLFFNGEGVSSILDQKDPFLYKCRSVQTSERKTRCIGSSARIYYASTSSLCNKNNRCNAGASSTAGNGSVHHEDDDEDEDDDFDEDNDVFDGDGLSCFRGLVLDIAYSWFDSKVLVVVVSLGILRDLASKCRRLETCYMFGVYGEGLVADVLEYYAKTVNSPSGSFYIPAVLRVPHLLQVVKRRIIKNNLSRKNILFRDNYTCQYCSSRDNLTIDHVVPAALGGEWTWENLVTACAKCNSKKGKKTLEEAKMKLIKVPKAPKDYDILAIPLTAAALRMLTVRKGTPEEWRQYLRSP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03460 306 Gene3D - 188 276 - -
Vimu6g03460 306 Pfam HNH endonuclease 213 263 IPR029471 -
Vimu6g03460 306 MobiDBLite consensus disorder prediction 72 95 - -
Vimu6g03460 306 CDD HNHc 202 253 IPR003615 -
Vimu6g03460 306 PANTHER SLL1193 PROTEIN 159 305 - -
Vimu6g03460 306 SMART HNH_5 200 250 IPR003615 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03460 - - gmx:100787021 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03460 6 31356763 31362599 Vimu6g03460 6 31356763 31362599 ECH